FFCP PHASE1:Hg19::chr2:45154282..45154288,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:45154282..45154288,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr2:45154282..45154288,- | |||
|id=chr2:45154282..45154288,- | |||
|ontology_enrichment_celltype=CL:0002322!1.80e-57!5;CL:0000064!4.87e-25!3;CL:0005012!4.87e-25!3;CL:0000067!4.87e-25!3;CL:0002304!4.87e-25!3;CL:0000075!7.39e-17!27;CL:0000710!8.57e-15!20;CL:0000147!2.95e-12!14;CL:0002077!4.24e-09!33;CL:0000148!3.63e-08!10;CL:0000541!3.63e-08!10;CL:0000325!8.98e-08!39;CL:0002586!2.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.14e-26,4;CL:0002222,7.14e-26,4;CL:0002224,7.14e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!1.06e-26!11;UBERON:0001778!4.87e-25!3;UBERON:0001775!4.87e-25!3;UBERON:0000019!5.10e-24!19;UBERON:0000047!5.10e-24!19;UBERON:0004088!5.10e-24!19;UBERON:0003072!5.10e-24!19;UBERON:0003071!5.10e-24!19;UBERON:0004128!5.10e-24!19;UBERON:0000970!7.89e-23!20;UBERON:0002104!9.42e-22!21;UBERON:0001456!9.42e-22!21;UBERON:0000020!7.05e-20!23;UBERON:0001874!3.91e-19!1;UBERON:0001032!4.66e-19!24;UBERON:0004456!4.66e-19!24;UBERON:0000488!4.70e-19!4;UBERON:0001882!5.62e-19!1;UBERON:0005403!5.62e-19!1;UBERON:0000369!1.06e-18!4;UBERON:0002435!1.06e-18!4;UBERON:0000204!1.06e-18!4;UBERON:0010082!1.06e-18!4;UBERON:0005085!8.44e-16!29;UBERON:0000966!1.30e-15!5;UBERON:0005388!1.30e-15!5;UBERON:0001802!1.30e-15!5;UBERON:0003056!5.58e-14!61;UBERON:0002203!4.81e-13!6;UBERON:0001768!4.81e-13!6;UBERON:0001801!2.44e-12!14;UBERON:0009663!4.06e-11!7;UBERON:0003075!7.22e-10!86;UBERON:0007284!7.22e-10!86;UBERON:0001444!1.40e-09!48;UBERON:0002346!2.03e-09!90;UBERON:0002308!7.45e-09!9;UBERON:0002420!7.45e-09!9;UBERON:0000125!7.45e-09!9;UBERON:0007245!7.45e-09!9;UBERON:0010009!7.45e-09!9;UBERON:0010011!7.45e-09!9;UBERON:0000454!7.45e-09!9;UBERON:0002200!1.56e-07!11;UBERON:0006876!1.56e-07!11;UBERON:0001781!2.32e-07!3;UBERON:0001782!2.32e-07!3;UBERON:0005424!2.32e-07!3;UBERON:0005383!2.97e-07!3;UBERON:0005382!2.97e-07!3;UBERON:0000033!9.60e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0000019;5.37e-22;19!UBERON:0000047;5.37e-22;19!UBERON:0004088;5.37e-22;19!UBERON:0010230;5.37e-22;19!UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0001456;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14!UBERON:0001444;3.54e-08;48!UBERON:0000153;1.91e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.14e-26,4;UBERON:0005389,7.14e-26,4;UBERON:0000484,7.14e-26,4;UBERON:0002546,7.14e-26,4;UBERON:0000965,7.14e-26,4;UBERON:0001803,7.14e-26,4;UBERON:0003073,7.14e-26,4;UBERON:0005426,7.14e-26,4;UBERON:0000019,5.71e-21,20;UBERON:0000047,5.71e-21,20;UBERON:0010312,5.71e-21,20;UBERON:0004088,5.71e-21,20;UBERON:0010230,5.71e-21,20;UBERON:0003072,5.71e-21,20;UBERON:0004128,5.71e-21,20;UBERON:0003071,5.71e-21,20;UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0001456,3.41e-19,22;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24;UBERON:0005085,5.04e-14,31;UBERON:0000076,1.07e-13,8;UBERON:0007625,2.37e-10,11;UBERON:0001444,2.38e-09,49;UBERON:0001801,2.00e-08,14;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62;UBERON:0003056,1.20e-07,61 | |||
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|short_description=p@chr2:45154282..45154288,- | |||
}} | }} |
Latest revision as of 10:22, 29 July 2015
Short description: | p@chr2:45154282..45154288, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45154282..45154288, - |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 7.14e-26 | 4 |
vertebrate lens cell | 7.14e-26 | 4 |
lens epithelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 7.14e-26 | 4 |
transparent eye structure | 7.14e-26 | 4 |
simple cuboidal epithelium | 7.14e-26 | 4 |
cranial placode | 7.14e-26 | 4 |
lens of camera-type eye | 7.14e-26 | 4 |
epithelium of lens | 7.14e-26 | 4 |
lens placode | 7.14e-26 | 4 |
lens vesicle | 7.14e-26 | 4 |
camera-type eye | 5.71e-21 | 20 |
simple eye | 5.71e-21 | 20 |
immature eye | 5.71e-21 | 20 |
ocular region | 5.71e-21 | 20 |
eyeball of camera-type eye | 5.71e-21 | 20 |
optic cup | 5.71e-21 | 20 |
optic vesicle | 5.71e-21 | 20 |
eye primordium | 5.71e-21 | 20 |
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
face | 3.41e-19 | 22 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
ectodermal placode | 5.04e-14 | 31 |
external ectoderm | 1.07e-13 | 8 |
pigment epithelium of eye | 2.37e-10 | 11 |
subdivision of head | 2.38e-09 | 49 |
anterior segment of eyeball | 2.00e-08 | 14 |
head | 2.46e-08 | 56 |
anterior region of body | 1.20e-07 | 62 |
craniocervical region | 1.20e-07 | 62 |
pre-chordal neural plate | 1.20e-07 | 61 |