FFCP PHASE1:Hg19::chr2:36796813..36796868,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:36796813..36796868,- | |||
|description=CAGE_peak_at_chr2:36796813..36796868,- | |description=CAGE_peak_at_chr2:36796813..36796868,- | ||
|id=chr2:36796813..36796868,- | |id=chr2:36796813..36796868,- | ||
Latest revision as of 09:47, 29 July 2015
| Short description: | p@chr2:36796813..36796868, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr2:36796813..36796868, - |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr2:36796813..36796868- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lining cell | 4.31e-46 | 58 |
| barrier cell | 4.31e-46 | 58 |
| mesothelial cell | 7.32e-30 | 19 |
| squamous epithelial cell | 1.00e-29 | 63 |
| endothelial cell of vascular tree | 2.45e-26 | 24 |
| endothelial cell | 2.87e-22 | 36 |
| meso-epithelial cell | 8.10e-20 | 45 |
| mesodermal cell | 1.14e-18 | 121 |
| epithelial cell | 4.75e-18 | 253 |
| lymphangioblast | 2.27e-17 | 6 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| pigmented layer of retina | 2.98e-14 | 3 |
| presumptive retinal pigmented epithelium | 2.98e-14 | 3 |
| simple squamous epithelium | 8.63e-14 | 22 |
| blood vessel endothelium | 1.92e-13 | 18 |
| endothelium | 1.92e-13 | 18 |
| cardiovascular system endothelium | 1.92e-13 | 18 |
| lymphatic vessel | 5.80e-13 | 8 |
| lymph vasculature | 5.80e-13 | 8 |
| lymphatic part of lymphoid system | 5.80e-13 | 8 |
| squamous epithelium | 6.12e-12 | 25 |
Showing 1 to 10 of 21 entries
