FFCP PHASE1:Hg19::chr2:238066550..238066568,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:238066550..238066568,+ | |||
|description=CAGE_peak_at_chr2:238066550..238066568,+ | |description=CAGE_peak_at_chr2:238066550..238066568,+ | ||
|id=chr2:238066550..238066568,+ | |id=chr2:238066550..238066568,+ | ||
|ontology_enrichment_celltype=CL:0000057!3.80e-17!75;CL:0000055!6.41e-16!180;CL:0000188!1.83e-11!9;CL:0002570!2.09e-10!8;CL:0002551!9.13e-10!6;CL:0002371!9.65e-09!591;CL:0002603!3.60e-08!3;CL:0002620!4.43e-08!23;CL:0000144!8.94e-08!625;CL:0002564!2.13e-07!3;CL:0000064!3.05e-07!3;CL:0005012!3.05e-07!3;CL:0000067!3.05e-07!3;CL:0002304!3.05e-07!3;CL:0002320!3.85e-07!365;CL:0002556!9.62e-07!6 | |ontology_enrichment_celltype=CL:0000057!3.80e-17!75;CL:0000055!6.41e-16!180;CL:0000188!1.83e-11!9;CL:0002570!2.09e-10!8;CL:0002551!9.13e-10!6;CL:0002371!9.65e-09!591;CL:0002603!3.60e-08!3;CL:0002620!4.43e-08!23;CL:0000144!8.94e-08!625;CL:0002564!2.13e-07!3;CL:0000064!3.05e-07!3;CL:0005012!3.05e-07!3;CL:0000067!3.05e-07!3;CL:0002304!3.05e-07!3;CL:0002320!3.85e-07!365;CL:0002556!9.62e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002575;3.55e-17;2!CL:0002549;1.17e-16;2!CL:0002602;2.98e-16;2!CL:0000708;3.78e-11;3!CL:0002603;3.78e-11;3!CL:0000669;4.91e-09;4!CL:0002552;4.99e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,3.87e-17,2;CL:0002549,5.32e-17,2;CL:0002602,1.27e-16,2;CL:0002603,4.20e-11,3;CL:0000708,5.43e-11,3;CL:0000669,5.12e-09,4;CL:0000057,6.64e-07,76;CL:0002552,6.76e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.51e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!8.57e-17!11;UBERON:0006876!8.57e-17!11;UBERON:0000914!6.40e-10!83;UBERON:0002329!6.40e-10!83;UBERON:0003077!6.40e-10!83;UBERON:0003059!6.40e-10!83;UBERON:0007282!6.40e-10!83;UBERON:0009618!6.40e-10!83;UBERON:0007285!6.40e-10!83;UBERON:0002203!1.23e-09!6;UBERON:0001768!1.23e-09!6;UBERON:0002067!5.35e-09!9;UBERON:0004016!5.35e-09!9;UBERON:0010083!5.35e-09!9;UBERON:0005284!8.00e-09!5;UBERON:0002242!2.13e-07!3;UBERON:0003068!2.13e-07!3;UBERON:0002328!2.13e-07!3;UBERON:0004880!2.13e-07!3;UBERON:0001778!3.05e-07!3;UBERON:0001775!3.05e-07!3;UBERON:0001801!5.91e-07!14;UBERON:0002199!8.25e-07!45;UBERON:0002416!8.25e-07!45;UBERON:0001758!9.62e-07!6;UBERON:0003672!9.62e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.17e-16;2!UBERON:0005358;1.17e-16;2!UBERON:0001886;1.17e-16;2!UBERON:0004086;1.17e-16;2!UBERON:0005282;1.17e-16;2!UBERON:0005281;1.17e-16;2!UBERON:0006444;2.98e-16;2!UBERON:0001995;2.98e-16;2!UBERON:0004715;2.98e-16;2!UBERON:0005284;1.42e-14;5!UBERON:0011135;2.46e-14;5!UBERON:0002216;2.46e-14;5!UBERON:0011134;2.46e-14;5!UBERON:0002209;2.46e-14;5!UBERON:0002213;2.46e-14;5!UBERON:0007844;2.46e-14;5!UBERON:0011138;2.46e-14;5!UBERON:0001130;2.46e-14;5!UBERON:0001066;2.46e-14;5!UBERON:0001468;2.46e-14;5!UBERON:0006876;1.83e-11;11!UBERON:0002418;3.78e-11;3!UBERON:0004755;3.78e-11;3!UBERON:0003210;3.78e-11;3!UBERON:0004905;3.70e-09;8!UBERON:0000982;3.70e-09;8!UBERON:0004770;3.70e-09;8!UBERON:0000941;5.51e-09;1!UBERON:0001785;5.51e-09;1!UBERON:0002464;5.51e-09;1!UBERON:0004904;5.51e-09;1!UBERON:0001021;5.51e-09;1!UBERON:0000075;6.34e-08;16!UBERON:0004765;2.38e-07;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,5.32e-17,2;UBERON:0005358,5.32e-17,2;UBERON:0001886,5.32e-17,2;UBERON:0004086,5.32e-17,2;UBERON:0005282,5.32e-17,2;UBERON:0005281,5.32e-17,2;UBERON:0006444,1.27e-16,2;UBERON:0001995,1.27e-16,2;UBERON:0004715,1.27e-16,2;UBERON:0005284,7.24e-15,5;UBERON:0011135,2.31e-14,5;UBERON:0002216,2.31e-14,5;UBERON:0011134,2.31e-14,5;UBERON:0002209,2.31e-14,5;UBERON:0002213,2.31e-14,5;UBERON:0005856,2.31e-14,5;UBERON:0005866,2.31e-14,5;UBERON:0005863,2.31e-14,5;UBERON:0007844,2.31e-14,5;UBERON:0011138,2.31e-14,5;UBERON:0001130,2.31e-14,5;UBERON:0001066,2.31e-14,5;UBERON:0001468,2.31e-14,5;UBERON:0006876,1.29e-11,11;UBERON:0002418,2.15e-11,3;UBERON:0004755,2.15e-11,3;UBERON:0003210,5.43e-11,3;UBERON:0004905,3.56e-09,8;UBERON:0000982,3.56e-09,8;UBERON:0004770,3.56e-09,8;UBERON:0000941,4.19e-09,1;UBERON:0001785,4.19e-09,1;UBERON:0002464,4.19e-09,1;UBERON:0004904,4.19e-09,1;UBERON:0001021,4.19e-09,1;UBERON:0003902,4.19e-09,1;UBERON:0005425,4.19e-09,1;UBERON:0000075,6.36e-08,16 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,1.98026164736075,1.32558950291166,0,0,0,0,1.72369481307503,1.02000345622126,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.283604451492204,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,1.96764655938411,2.88087962239999,0,0.312160076830321,0,0.298897361103602,0.587172493218824,0.323745888736263,1.82586048712923,1.02077085627447,1.10550885580591,0.619954687054593,0,0,0,0,2.02003336744879,0.875829639103749,0.554128230968366,0,0.30648779579902,0,0,0.717558542755448,0.213557388818567,0,0,0.309157587715317,0,0,0,0,0,0,1.2931684545505,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,1.12131084345361,0,1.10007428731425,0,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.271265023699736,0,0,0,0,0,0,0,0,0.553107505625109,0.0868836144680828,3.52442083432933,2.05886054286514,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.462629081407967,0.177561725313127,0.9033987161519,0,1.27831416305955,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.308097234229289,0.307007349452259,0.551346289938122,0.859361958946189,0,0.426133137080504,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0.949138274156178,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,1.13841952129715,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04478362020812,0.233713309847224,0.554805861502613,3.97746311077687,2.51567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85997509083376,0,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr2:238066550..238066568,+ | |short_description=p@chr2:238066550..238066568,+ | ||
}} | }} |
Latest revision as of 08:09, 29 July 2015
Short description: | p@chr2:238066550..238066568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:238066550..238066568, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 3.87e-17 | 2 |
fibroblast of choroid plexus | 5.32e-17 | 2 |
annulus pulposus cell | 1.27e-16 | 2 |
astrocyte of the cerebellum | 4.20e-11 | 3 |
leptomeningeal cell | 5.43e-11 | 3 |
pericyte cell | 5.12e-09 | 4 |
fibroblast | 6.64e-07 | 76 |
fibroblast of gingiva | 6.76e-07 | 5 |