FFCP PHASE1:Hg19::chr2:235157093..235157098,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:235157093..235157098,+ to FFCP PHASE1:Hg19::chr2:235157093..235157098,+: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:235157093..235157098,+ | |||
|coexpression_cluster_id=C412 | |||
|description=CAGE_peak_at_chr2:235157093..235157098,+ | |||
|id=chr2:235157093..235157098,+ | |||
|ontology_enrichment_celltype=CL:1000507!3.21e-19!12;CL:1000494!3.21e-19!12;CL:1000497!1.11e-15!18;CL:0002518!1.11e-15!18;CL:1000449!4.56e-14!16;CL:0000239!9.87e-13!3;CL:1000615!9.87e-13!3;CL:0002306!9.87e-13!3;CL:0002076!7.94e-12!43;CL:0000066!2.66e-11!254;CL:0002149!1.07e-10!6;CL:0002255!1.07e-10!6;CL:0002681!4.64e-10!13;CL:0002584!4.64e-10!13;CL:0000223!3.35e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000239;2.95e-21;3!CL:1000615;2.95e-21;3!CL:0002306;2.95e-21;3!CL:0002149;2.02e-11;6!CL:0002255;2.02e-11;6!CL:1000507;4.96e-07;10!CL:1000494;4.96e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.17e-21,3;CL:1000615,2.17e-21,3;CL:0002306,2.17e-21,3;CL:0002149,2.02e-11,6;CL:0002255,2.02e-11,6;CL:1000507,4.52e-07,10;CL:1000494,4.52e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.33e-07;10 | |||
|ontology_enrichment_disease=DOID:3001!1.07e-10!6 | |||
|ontology_enrichment_disease_v019=DOID:6193;6.47e-17;1!DOID:3001;2.02e-11;6!DOID:3350;4.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.47e-17,1;DOID:3001,2.02e-11,6;DOID:3350,4.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!3.21e-19!12;UBERON:0001231!3.21e-19!12;UBERON:0004810!3.21e-19!12;UBERON:0002113!1.47e-17!27;UBERON:0003918!1.47e-17!27;UBERON:0005095!1.47e-17!27;UBERON:0007687!1.47e-17!27;UBERON:0000489!2.14e-14!32;UBERON:0004211!4.56e-14!16;UBERON:0001285!4.56e-14!16;UBERON:0007684!4.56e-14!16;UBERON:0003220!4.56e-14!16;UBERON:0004208!4.56e-14!16;UBERON:0006555!3.70e-13!17;UBERON:0005103!3.70e-13!17;UBERON:0000083!3.70e-13!17;UBERON:0009201!3.70e-13!17;UBERON:0004819!3.70e-13!17;UBERON:0006553!3.70e-13!17;UBERON:0003074!3.70e-13!17;UBERON:0003060!3.70e-13!17;UBERON:0006853!9.87e-13!3;UBERON:0007685!9.87e-13!3;UBERON:0004134!9.87e-13!3;UBERON:0000080!2.38e-12!18;UBERON:0002120!2.38e-12!18;UBERON:0004875!2.38e-12!18;UBERON:0005721!2.38e-12!18;UBERON:0005754!2.38e-12!18;UBERON:0007297!2.38e-12!18;UBERON:0006554!1.40e-11!44;UBERON:0001008!2.93e-11!45;UBERON:0004876!5.62e-11!20;UBERON:0003887!2.17e-10!21;UBERON:0000058!2.98e-10!26;UBERON:0001225!4.64e-10!13;UBERON:0008987!4.64e-10!13;UBERON:0005172!1.21e-08!55;UBERON:0005173!1.21e-08!55;UBERON:0001851!4.83e-08!16;UBERON:0000353!1.58e-07!17;UBERON:0002417!1.59e-07!61;UBERON:0000916!1.59e-07!61;UBERON:0003064!9.73e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;2.95e-21;3!UBERON:0007685;2.95e-21;3!UBERON:0004134;2.95e-21;3!UBERON:0004211;4.96e-07;10!UBERON:0009773;4.96e-07;10!UBERON:0001231;4.96e-07;10!UBERON:0004810;4.96e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.17e-21,3;UBERON:0007685,2.17e-21,3;UBERON:0004134,2.17e-21,3;UBERON:0004810,4.52e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,1.53650399572076,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,1.66215201785745,2.91037181138832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.554698692052555,0.173559738335131,0,0.0870592065804026,0,4.81560890920526,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,2.31037150325144,2.510468311496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,2.5426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,1.81534561833168,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.755159641608,17.1997009015938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,1.53650399572076,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,1.66215201785745,2.91037181138832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0.554698692052555,0.173559738335131,0,0.0870592065804026,0,4.81560890920526,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,2.31037150325144,2.510468311496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,2.5426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,1.81534561833168,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.755159641608,17.1997009015938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,1.33982065078089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:235157093..235157098,+ | |||
}} | }} |
Latest revision as of 07:59, 29 July 2015
Short description: | p@chr2:235157093..235157098, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:235157093..235157098, + |
Coexpression cluster: | C412_serous_breast_papillotubular_ductus_seminal_kidney_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.17e-21 | 3 |
kidney cortex tubule cell | 2.17e-21 | 3 |
epithelial cell of proximal tubule | 2.17e-21 | 3 |
epithelial cell of uterus | 2.02e-11 | 6 |
stromal cell of endometrium | 2.02e-11 | 6 |
kidney tubule cell | 4.52e-07 | 10 |
nephron tubule epithelial cell | 4.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.17e-21 | 3 |
region of nephron tubule | 2.17e-21 | 3 |
proximal tubule | 2.17e-21 | 3 |
nephron tubule epithelium | 4.52e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.47e-17 | 1 |
female reproductive endometrioid cancer | 2.02e-11 | 6 |
mesenchymal cell neoplasm | 4.02e-09 | 2 |