FFCP PHASE1:Hg19::chr2:234322838..234322854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:234322838..234322854,+ | |||
|coexpression_cluster_id=C1028 | |||
|description=CAGE_peak_at_chr2:234322838..234322854,+ | |description=CAGE_peak_at_chr2:234322838..234322854,+ | ||
|id=chr2:234322838..234322854,+ | |id=chr2:234322838..234322854,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.21e-10!254 | |ontology_enrichment_celltype=CL:0000066!2.21e-10!254 | ||
|ontology_enrichment_celltype_v019=CL:0000322;9.31e-12;3!CL:0000319;8.67e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.22e-11,3;CL:0000319,8.68e-10,1;CL:0000066,4.36e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.58e-37;29!UBERON:0004140;3.82e-09;1 | |||
|ontology_enrichment_disease=DOID:305!1.79e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:3030;8.67e-10;1!DOID:178;1.83e-09;1!DOID:326;1.83e-09;1!DOID:3978;1.83e-09;1!DOID:3394;1.83e-09;1!DOID:5844;1.83e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.63e-12,106;DOID:3030,8.68e-10,1;DOID:178,1.69e-09,1;DOID:326,1.69e-09,1;DOID:3978,1.69e-09,1;DOID:3394,1.69e-09,1;DOID:5844,1.69e-09,1;DOID:0050687,1.79e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.81e-15!9;UBERON:0000065!2.25e-10!53;UBERON:0008947!4.28e-10!38;UBERON:0003258!4.28e-10!38;UBERON:0001557!1.45e-08!19;UBERON:0000058!1.50e-07!26;UBERON:0000072!2.69e-07!46;UBERON:0002294!7.66e-07!7;UBERON:0001173!7.66e-07!7;UBERON:0004912!7.66e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.83e-71;9!UBERON:0001557;4.83e-71;9!UBERON:0000065;1.42e-25;44!UBERON:0000072;6.41e-24;37!UBERON:0001004;5.52e-13;65!UBERON:0004821;9.31e-12;3!UBERON:0007499;9.31e-12;3!UBERON:0003215;9.31e-12;3!UBERON:0010368;9.31e-12;3!UBERON:0009911;9.31e-12;3!UBERON:0002299;9.31e-12;3!UBERON:0006524;9.31e-12;3!UBERON:0008874;9.31e-12;3!UBERON:0002169;9.31e-12;3!UBERON:0004894;9.31e-12;3!UBERON:0002134;1.83e-09;1!UBERON:0005208;1.83e-09;1!UBERON:0004145;1.83e-09;1!UBERON:0005946;1.83e-09;1!UBERON:0005965;1.83e-09;1!UBERON:0002078;1.83e-09;1!UBERON:0009856;4.88e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.96e-71,9;UBERON:0008947,2.76e-33,38;UBERON:0003258,2.76e-33,38;UBERON:0001557,4.52e-33,19;UBERON:0000065,1.75e-26,54;UBERON:0000072,1.54e-22,47;UBERON:0001004,1.17e-18,74;UBERON:0001041,2.91e-13,87;UBERON:0004821,1.22e-11,3;UBERON:0003215,1.22e-11,3;UBERON:0010368,1.22e-11,3;UBERON:0009911,1.22e-11,3;UBERON:0002299,1.22e-11,3;UBERON:0006524,1.22e-11,3;UBERON:0008874,1.22e-11,3;UBERON:0002169,1.22e-11,3;UBERON:0004894,1.22e-11,3;UBERON:0004921,1.20e-10,118;UBERON:0002134,2.16e-09,1;UBERON:0005208,2.16e-09,1;UBERON:0005946,2.16e-09,1;UBERON:0005965,2.16e-09,1;UBERON:0002078,2.16e-09,1;UBERON:0001048,1.50e-08,160;UBERON:0004119,1.94e-08,160;UBERON:0000925,1.94e-08,160;UBERON:0006595,1.94e-08,160;UBERON:0001007,3.24e-08,145;UBERON:0001555,3.24e-08,145;UBERON:0007026,3.24e-08,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,9.33788958705734,27.9120467188971,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.50401373190767,0.434539556882471,1.5905718941022,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12952240071719,1.51726221070292,3.37415441836875,2.86764329104224,4.13970943775572,3.79632990577755,2.42696354688296,1.37355025587742,2.69323009862473,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.422206515571503,0,0,0.647747748306418,0,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.412164046590889,0.366277859273374,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.960950336825531,1.40373983744043,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.409074730008619,0,0,0.629078458031288,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.683652335082007,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0.69647365264322,0,0,0.19351266257817,0.146178634172371,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0.721429382263803,0.426905989478705,0.599428828746391,0,0,0,0.14405479798815,0.248505071130865,0,0.407712618220842,0.523014231561666,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0.229160424011684,2.15361907373044,2.59582700648688,0.858452096273142,0.223171457441873,1.81395375714161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0.342173675768659,0,1.28144895081234,0.943225830597996,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0.372578417648301,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0.680117776536817,0,0.244736704506468,4.65630986811867,0.308801447160972,0.877136198314828,0,1.54331230616732,0,0,0,0,0,0,0,0,0,10.5682350764099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,0,0,0,0,0.60511520611056,0,0,0.327543835020193,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,1.06374456795571,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,2.2910686854405,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0,0,0.224263725161227,0.0636471582781649,0.808468755832877,0.653150243690884,0,0,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,9.33788958705734,27.9120467188971,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.50401373190767,0.434539556882471,1.5905718941022,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12952240071719,1.51726221070292,3.37415441836875,2.86764329104224,4.13970943775572,3.79632990577755,2.42696354688296,1.37355025587742,2.69323009862473,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.422206515571503,0,0,0.647747748306418,0,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,0.412164046590889,0.366277859273374,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.960950336825531,1.40373983744043,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0,0.307160702099232,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.409074730008619,0,0,0.629078458031288,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.683652335082007,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.816164040795739,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0.69647365264322,0,0,0.19351266257817,0.146178634172371,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0.721429382263803,0.426905989478705,0.599428828746391,0,0,0,0.14405479798815,0.248505071130865,0,0.407712618220842,0.523014231561666,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0.229160424011684,2.15361907373044,2.59582700648688,0.858452096273142,0.223171457441873,1.81395375714161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0.342173675768659,0,1.28144895081234,0.943225830597996,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0,0.372578417648301,0,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0.680117776536817,0,0.244736704506468,4.65630986811867,0.308801447160972,0.877136198314828,0,1.54331230616732,0,0,0,0,0,0,0,0,0,10.5682350764099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0.693153996902029,0,0,0,0,0.60511520611056,0,0,0.327543835020193,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,1.06374456795571,0.111231401892069,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,2.2910686854405,0.31020638566432,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0,0,0,0.224263725161227,0.0636471582781649,0.808468755832877,0.653150243690884,0,0,0.143444410785353,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:234322838..234322854,+ | |short_description=p@chr2:234322838..234322854,+ | ||
}} | }} |
Latest revision as of 07:55, 29 July 2015
Short description: | p@chr2:234322838..234322854, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:234322838..234322854, + |
Coexpression cluster: | C1028_Alveolar_Renal_iPS_teratocarcinoma_H9_HES3GFP_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.22e-11 | 3 |
mucus secreting cell | 8.68e-10 | 1 |
epithelial cell | 4.36e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.96e-71 | 9 |
respiratory primordium | 2.76e-33 | 38 |
endoderm of foregut | 2.76e-33 | 38 |
upper respiratory tract | 4.52e-33 | 19 |
respiratory tract | 1.75e-26 | 54 |
segment of respiratory tract | 1.54e-22 | 47 |
respiratory system | 1.17e-18 | 74 |
foregut | 2.91e-13 | 87 |
pulmonary alveolus epithelium | 1.22e-11 | 3 |
alveolus | 1.22e-11 | 3 |
pulmonary lobule | 1.22e-11 | 3 |
lobule | 1.22e-11 | 3 |
alveolus of lung | 1.22e-11 | 3 |
alveolar system | 1.22e-11 | 3 |
pulmonary acinus | 1.22e-11 | 3 |
alveolar sac | 1.22e-11 | 3 |
alveolar wall | 1.22e-11 | 3 |
subdivision of digestive tract | 1.20e-10 | 118 |
tricuspid valve | 2.16e-09 | 1 |
right atrium valve | 2.16e-09 | 1 |
outflow tract of atrium | 2.16e-09 | 1 |
outflow part of right atrium | 2.16e-09 | 1 |
right cardiac atrium | 2.16e-09 | 1 |
primordium | 1.50e-08 | 160 |
endoderm-derived structure | 1.94e-08 | 160 |
endoderm | 1.94e-08 | 160 |
presumptive endoderm | 1.94e-08 | 160 |
digestive system | 3.24e-08 | 145 |
digestive tract | 3.24e-08 | 145 |
primitive gut | 3.24e-08 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.63e-12 | 106 |
mucinous adenocarcinoma | 8.68e-10 | 1 |
vascular disease | 1.69e-09 | 1 |
ischemia | 1.69e-09 | 1 |
extrinsic cardiomyopathy | 1.69e-09 | 1 |
myocardial ischemia | 1.69e-09 | 1 |
myocardial infarction | 1.69e-09 | 1 |
cell type cancer | 1.79e-08 | 143 |