FFCP PHASE1:Hg19::chr2:232030473..232030487,+: Difference between revisions
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|id=chr2:232030473..232030487,+
|short_description=p@chr2:232030473..232030487,+
|description=CAGE_peak_at_chr2:232030473..232030487,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:232030473..232030487,+ | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_at_chr2:232030473..232030487,+ | |||
|id=chr2:232030473..232030487,+ | |||
|ontology_enrichment_celltype=CL:0002504!1.37e-13!3;CL:1000279!1.37e-13!3;CL:1000280!1.37e-13!3;CL:1000487!2.22e-09!2;CL:0002334!2.22e-08!12;CL:0002569!3.39e-07!6;CL:0002586!6.52e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002568;2.78e-26;1!CL:0002504;1.19e-09;3!CL:1000279;1.19e-09;3!CL:1000280;1.19e-09;3!CL:0002563;1.59e-07;4!CL:0000306;1.86e-07;4!CL:0002222;1.86e-07;4!CL:0002224;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002568,2.78e-26,1;CL:0002504,1.19e-09,3;CL:1000279,1.19e-09,3;CL:1000280,1.19e-09,3;CL:0002563,1.59e-07,4;CL:0000306,2.04e-07,4;CL:0002222,2.04e-07,4;CL:0002224,2.04e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003422!3.39e-07!6;UBERON:0001781!6.52e-07!3;UBERON:0001782!6.52e-07!3;UBERON:0005424!6.52e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.59e-07;4!UBERON:0001262;1.59e-07;4!UBERON:0004786;1.59e-07;4!UBERON:0004808;1.59e-07;4!UBERON:0001277;1.59e-07;4!UBERON:0010077;1.86e-07;4!UBERON:0005389;1.86e-07;4!UBERON:0000484;1.86e-07;4!UBERON:0000965;1.86e-07;4!UBERON:0001803;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.59e-07,4;UBERON:0001262,1.59e-07,4;UBERON:0004786,1.59e-07,4;UBERON:0004808,1.59e-07,4;UBERON:0001277,1.59e-07,4;UBERON:0010077,2.04e-07,4;UBERON:0005389,2.04e-07,4;UBERON:0000484,2.04e-07,4;UBERON:0002546,2.04e-07,4;UBERON:0000965,2.04e-07,4;UBERON:0001803,2.04e-07,4;UBERON:0003073,2.04e-07,4;UBERON:0005426,2.04e-07,4 | |||
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| ||
|short_description=p@chr2:232030473..232030487,+ | |||
}} | }} |
Latest revision as of 07:36, 29 July 2015
Short description: | p@chr2:232030473..232030487, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:232030473..232030487, + |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of Wharton's jelly | 2.78e-26 | 1 |
enteric smooth muscle cell | 1.19e-09 | 3 |
smooth muscle cell of large intestine | 1.19e-09 | 3 |
smooth muscle cell of colon | 1.19e-09 | 3 |
intestinal epithelial cell | 1.59e-07 | 4 |
crystallin accumulating cell | 2.04e-07 | 4 |
vertebrate lens cell | 2.04e-07 | 4 |
lens epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.59e-07 | 4 |
wall of intestine | 1.59e-07 | 4 |
gastrointestinal system mucosa | 1.59e-07 | 4 |
gastrointestinal system epithelium | 1.59e-07 | 4 |
intestinal epithelium | 1.59e-07 | 4 |
cuboidal epithelium | 2.04e-07 | 4 |
transparent eye structure | 2.04e-07 | 4 |
simple cuboidal epithelium | 2.04e-07 | 4 |
cranial placode | 2.04e-07 | 4 |
lens of camera-type eye | 2.04e-07 | 4 |
epithelium of lens | 2.04e-07 | 4 |
lens placode | 2.04e-07 | 4 |
lens vesicle | 2.04e-07 | 4 |