FFCP PHASE1:Hg19::chr2:227008823..227008831,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:227008823..227008831,-
|short_description=p@chr2:227008823..227008831,-
|description=CAGE_peak_at_chr2:227008823..227008831,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:227008823..227008831,- | |||
|description=CAGE_peak_at_chr2:227008823..227008831,- | |||
|id=chr2:227008823..227008831,- | |||
|ontology_enrichment_celltype=CL:0002076!1.89e-31!43;CL:0000223!1.23e-25!59;CL:0002368!1.82e-20!13;CL:0002251!1.26e-16!21;CL:0000066!3.68e-14!254;CL:0002202!6.38e-14!9;CL:0002632!6.38e-14!9;CL:0000240!2.78e-12!6;CL:0000311!2.78e-12!6;CL:0000079!2.78e-12!6;CL:0000237!2.78e-12!6;CL:0000036!2.78e-12!6;CL:0000357!2.78e-12!6;CL:0000114!2.78e-12!6;CL:0000068!2.81e-11!3;CL:0000069!2.81e-11!3;CL:0000307!2.81e-11!3;CL:0000377!2.81e-11!3;CL:0002328!3.11e-11!3;CL:0002621!7.30e-11!3;CL:0002623!7.30e-11!3;CL:0002336!4.52e-09!1;CL:0002261!4.52e-09!1;CL:0002170!4.52e-09!1;CL:0000244!1.78e-08!4;CL:0000731!1.78e-08!4;CL:0000220!2.56e-07!246;CL:0002321!3.13e-07!248;CL:0000312!3.44e-07!5;CL:0000622!7.48e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000240;6.48e-43;6!CL:0000311;6.48e-43;6!CL:0000079;6.48e-43;6!CL:0000237;6.48e-43;6!CL:0000307;2.40e-38;3!CL:0002252;8.64e-30;1!CL:0002336;3.16e-29;1!CL:0002261;3.16e-29;1!CL:0002170;3.16e-29;1!CL:0002202;9.51e-29;9!CL:0002632;9.51e-29;9!CL:0000312;1.02e-23;5!CL:0002368;3.55e-20;13!CL:0000362;1.15e-13;9!CL:0002076;4.22e-11;42!CL:0002328;1.09e-10;3!CL:0002159;3.88e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000240,5.62e-43,6;CL:0000311,5.62e-43,6;CL:0000079,5.62e-43,6;CL:0000237,5.62e-43,6;CL:0000036,5.62e-43,6;CL:0000357,5.62e-43,6;CL:0000114,5.62e-43,6;CL:0000068,3.19e-38,3;CL:0000069,3.19e-38,3;CL:0000307,3.19e-38,3;CL:0000377,3.19e-38,3;CL:0002252,9.99e-30,1;CL:0002336,3.16e-29,1;CL:0002261,3.16e-29,1;CL:0002170,3.16e-29,1;CL:0002202,9.98e-29,9;CL:0002632,9.98e-29,9;CL:0000312,9.08e-24,5;CL:0002368,3.67e-20,13;CL:0002076,4.10e-17,42;CL:0000362,1.08e-13,9;CL:0000223,1.68e-12,58;CL:0002328,9.90e-11,3;CL:0002159,3.72e-09,14 | |||
|ontology_enrichment_development_v019=CL:0000357;6.48e-43;6!CL:0000114;6.48e-43;6!CL:0000377;2.40e-38;3!CL:0000223;5.03e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!9.82e-13!72;UBERON:0004119!2.83e-12!169;UBERON:0000925!2.83e-12!169;UBERON:0006595!2.83e-12!169;UBERON:0000165!3.44e-12!28;UBERON:0000930!3.44e-12!28;UBERON:0000166!3.60e-12!21;UBERON:0004815!3.11e-11!3;UBERON:0002031!3.11e-11!3;UBERON:0001949!7.30e-11!3;UBERON:0000161!1.54e-09!35;UBERON:0007196!5.36e-09!14;UBERON:0001558!5.36e-09!14;UBERON:0002185!1.22e-08!4;UBERON:0000997!2.06e-08!1;UBERON:0005056!2.06e-08!1;UBERON:0001007!6.07e-08!155;UBERON:0001555!6.07e-08!155;UBERON:0007026!6.07e-08!155;UBERON:0000365!6.08e-07!5;UBERON:0003729!7.70e-07!5;UBERON:0001444!8.91e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.34e-17;15!UBERON:0001558;1.34e-17;15!UBERON:0003126;4.19e-17;7!UBERON:0001005;4.19e-17;7!UBERON:0005178;1.16e-13;34!UBERON:0002224;1.16e-13;34!UBERON:0005181;6.18e-12;35!UBERON:0001043;7.07e-11;3!UBERON:0004815;1.09e-10;3!UBERON:0002031;1.09e-10;3!UBERON:0001003;1.37e-08;15!UBERON:0007376;1.37e-08;15!UBERON:0002185;6.39e-07;5!UBERON:0000072;7.80e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,1.38e-17,15;UBERON:0001558,1.38e-17,15;UBERON:0003126,4.73e-17,7;UBERON:0001005,4.73e-17,7;UBERON:0005178,8.59e-14,34;UBERON:0002224,8.59e-14,34;UBERON:0005181,2.05e-13,35;UBERON:0001043,7.42e-11,3;UBERON:0009143,7.42e-11,3;UBERON:0004815,9.90e-11,3;UBERON:0002031,9.90e-11,3;UBERON:0000915,3.45e-09,52;UBERON:0001003,1.31e-08,15;UBERON:0007376,1.31e-08,15;UBERON:0007383,1.31e-08,15;UBERON:0008947,2.27e-07,38;UBERON:0003258,2.27e-07,38;UBERON:0002185,6.04e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95101027471052,0,2.21163739305588,1.11106134190236,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,2.01090682660736,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92484646928281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95101027471052,0,2.21163739305588,1.11106134190236,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05844323998063,2.01090682660736,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62164849248911,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:227008823..227008831,- | |||
}} | }} |
Latest revision as of 07:17, 29 July 2015
Short description: | p@chr2:227008823..227008831, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:227008823..227008831, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelial cell | 5.62e-43 | 6 |
keratin accumulating cell | 5.62e-43 | 6 |
stratified epithelial cell | 5.62e-43 | 6 |
keratinizing barrier epithelial cell | 5.62e-43 | 6 |
epithelial fate stem cell | 5.62e-43 | 6 |
stratified epithelial stem cell | 5.62e-43 | 6 |
surface ectodermal cell | 5.62e-43 | 6 |
duct epithelial cell | 3.19e-38 | 3 |
branched duct epithelial cell | 3.19e-38 | 3 |
tracheal epithelial cell | 3.19e-38 | 3 |
tracheoblast | 3.19e-38 | 3 |
epithelial cell of esophagus | 9.99e-30 | 1 |
buccal mucosa cell | 3.16e-29 | 1 |
endothelial cell of viscerocranial mucosa | 3.16e-29 | 1 |
keratinized cell of the oral mucosa | 3.16e-29 | 1 |
epithelial cell of tracheobronchial tree | 9.98e-29 | 9 |
epithelial cell of lower respiratory tract | 9.98e-29 | 9 |
keratinocyte | 9.08e-24 | 5 |
respiratory epithelial cell | 3.67e-20 | 13 |
endo-epithelial cell | 4.10e-17 | 42 |
epidermal cell | 1.08e-13 | 9 |
endodermal cell | 1.68e-12 | 58 |
bronchial epithelial cell | 9.90e-11 | 3 |
general ecto-epithelial cell | 3.72e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 1.38e-17 | 15 |
lower respiratory tract | 1.38e-17 | 15 |
trachea | 4.73e-17 | 7 |
respiratory airway | 4.73e-17 | 7 |
thoracic cavity element | 8.59e-14 | 34 |
thoracic cavity | 8.59e-14 | 34 |
thoracic segment organ | 2.05e-13 | 35 |
esophagus | 7.42e-11 | 3 |
esophageal region | 7.42e-11 | 3 |
lower respiratory tract epithelium | 9.90e-11 | 3 |
epithelium of bronchus | 9.90e-11 | 3 |
thoracic segment of trunk | 3.45e-09 | 52 |
skin epidermis | 1.31e-08 | 15 |
outer epithelium | 1.31e-08 | 15 |
enveloping layer of ectoderm | 1.31e-08 | 15 |
respiratory primordium | 2.27e-07 | 38 |
endoderm of foregut | 2.27e-07 | 38 |
bronchus | 6.04e-07 | 5 |