FFCP PHASE1:Hg19::chr2:220553203..220553207,+: Difference between revisions
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|id=chr2:220553203..220553207,+
|short_description=p@chr2:220553203..220553207,+
|description=CAGE_peak_at_chr2:220553203..220553207,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:220553203..220553207,+ | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_at_chr2:220553203..220553207,+ | |||
|id=chr2:220553203..220553207,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.33e-15!254;CL:0000076!8.77e-11!62;CL:0002076!1.68e-10!43;CL:0000223!8.44e-10!59;CL:0002251!1.44e-07!21;CL:0000220!5.52e-07!246;CL:0002321!7.96e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.96e-08;1!CL:1001319;1.26e-07;1!CL:1000600;1.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.38e-08,253;CL:0000076,2.14e-08,63;CL:0000313,5.96e-08,1;CL:1001319,1.39e-07,1;CL:1000600,1.39e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.90e-19!235;DOID:14566!3.21e-18!239;DOID:0050687!8.38e-18!143;DOID:305!7.32e-16!106;DOID:1749!3.73e-14!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.22e-21;14!DOID:0050619;4.88e-08;1!DOID:1357;4.88e-08;1!DOID:2152;5.96e-08;1!DOID:6193;8.28e-08;1!DOID:3905;5.09e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.30e-21,14;DOID:162,1.89e-14,235;DOID:14566,4.83e-14,239;DOID:305,8.65e-14,106;DOID:0050687,1.18e-13,143;DOID:0050619,5.22e-08,1;DOID:1357,5.22e-08,1;DOID:2152,5.96e-08,1;DOID:6193,6.80e-08,1;DOID:0050686,2.83e-07,137;DOID:3905,5.14e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000344!7.94e-09!12;UBERON:0003343!4.18e-08!4;UBERON:0004785!4.18e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;3.54e-15;4!UBERON:0004785;3.54e-15;4!UBERON:0000974;2.75e-10;6!UBERON:0001764;4.88e-08;1!UBERON:0001825;4.88e-08;1!UBERON:0004911;5.96e-08;1!UBERON:0004645;1.26e-07;1!UBERON:0001256;1.26e-07;1!UBERON:0001259;1.26e-07;1!UBERON:0007195;2.24e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.80e-15,4;UBERON:0004785,3.80e-15,4;UBERON:0001764,5.22e-08,1;UBERON:0001825,5.22e-08,1;UBERON:0004911,5.96e-08,1;UBERON:0004645,1.39e-07,1;UBERON:0001256,1.39e-07,1;UBERON:0001259,1.39e-07,1;UBERON:0007195,2.63e-07,1 | |||
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| ||
|short_description=p@chr2:220553203..220553207,+ | |||
}} | }} |
Latest revision as of 07:01, 29 July 2015
Short description: | p@chr2:220553203..220553207, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:220553203..220553207, + |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.38e-08 | 253 |
squamous epithelial cell | 2.14e-08 | 63 |
serous secreting cell | 5.96e-08 | 1 |
bladder cell | 1.39e-07 | 1 |
lower urinary tract cell | 1.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.80e-15 | 4 |
respiratory system mucosa | 3.80e-15 | 4 |
maxillary sinus | 5.22e-08 | 1 |
paranasal sinus | 5.22e-08 | 1 |
epithelium of female gonad | 5.96e-08 | 1 |
urinary bladder urothelium | 1.39e-07 | 1 |
wall of urinary bladder | 1.39e-07 | 1 |
mucosa of urinary bladder | 1.39e-07 | 1 |
stroma of bone marrow | 2.63e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.30e-21 | 14 |
cancer | 1.89e-14 | 235 |
disease of cellular proliferation | 4.83e-14 | 239 |
carcinoma | 8.65e-14 | 106 |
cell type cancer | 1.18e-13 | 143 |
paranasal sinus cancer | 5.22e-08 | 1 |
maxillary sinus cancer | 5.22e-08 | 1 |
ovary epithelial cancer | 5.96e-08 | 1 |
epithelioid sarcoma | 6.80e-08 | 1 |
organ system cancer | 2.83e-07 | 137 |
lung carcinoma | 5.14e-07 | 9 |