FFCP PHASE1:Hg19::chr2:219252546..219252572,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:219252546..219252572,+ | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr2:219252546..219252572,+ | |||
|id=chr2:219252546..219252572,+ | |||
|ontology_enrichment_celltype=CL:0002194!7.24e-49!63;CL:0000576!7.24e-49!63;CL:0000040!7.24e-49!63;CL:0000559!7.24e-49!63;CL:0002009!9.02e-47!65;CL:0000766!2.48e-46!76;CL:0000557!8.36e-45!71;CL:0002057!4.36e-44!42;CL:0000860!5.82e-44!45;CL:0000839!1.20e-43!70;CL:0000763!1.64e-27!112;CL:0000049!1.64e-27!112;CL:0002087!2.99e-21!119;CL:0000738!8.81e-20!140;CL:0002031!1.35e-17!124;CL:0000037!4.08e-14!172;CL:0000566!4.08e-14!172;CL:0002032!2.60e-13!165;CL:0000837!2.60e-13!165;CL:0000988!2.51e-12!182;CL:0000235!1.21e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.21e-86;39!CL:0000234;5.21e-86;39!CL:0000860;3.16e-85;33!CL:0002057;3.16e-85;33!CL:0000576;3.56e-44;48!CL:0000766;5.39e-36;69!CL:0000763;5.15e-18;100!CL:0000235;2.26e-17;6!CL:0002087;4.34e-11;104!CL:0000738;3.91e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.56e-94,48;CL:0000234,1.56e-94,48;CL:0002194,1.11e-78,59;CL:0000576,1.11e-78,59;CL:0000040,1.11e-78,59;CL:0000559,1.11e-78,59;CL:0000860,1.68e-78,42;CL:0002057,1.68e-78,42;CL:0002009,6.99e-76,61;CL:0000557,1.39e-72,67;CL:0000766,2.45e-71,72;CL:0000839,1.29e-69,66;CL:0000763,1.80e-50,108;CL:0000049,1.80e-50,108;CL:0002087,8.82e-37,115;CL:0002031,6.33e-35,120;CL:0000738,4.34e-34,136;CL:0002032,3.97e-31,161;CL:0000837,3.97e-31,161;CL:0000037,1.77e-29,168;CL:0000988,1.50e-27,177;CL:0000235,3.92e-17,6;CL:0000134,2.94e-10,354;CL:0002320,6.85e-10,361;CL:0000219,1.35e-08,386;CL:0000048,5.07e-07,427;CL:0000723,8.34e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.67e-59;42!CL:0000049;2.18e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-41!102;UBERON:0003061!1.21e-41!102;UBERON:0002371!1.50e-37!80;UBERON:0002193!2.85e-37!112;UBERON:0001474!1.41e-33!86;UBERON:0004765!4.42e-28!101;UBERON:0001434!4.42e-28!101;UBERON:0002405!1.57e-27!115;UBERON:0003081!1.47e-12!216;UBERON:0002204!1.34e-11!167;UBERON:0000062!4.42e-10!511;UBERON:0000926!3.24e-08!448;UBERON:0004120!3.24e-08!448;UBERON:0006603!3.24e-08!448;UBERON:0000467!8.34e-08!625;UBERON:0000480!9.82e-08!626;UBERON:0000923!3.00e-07!604;UBERON:0005291!3.00e-07!604;UBERON:0006598!3.00e-07!604;UBERON:0002532!3.00e-07!604;UBERON:0002050!3.51e-07!605;UBERON:0005423!3.51e-07!605;UBERON:0000922!4.40e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.88e-63,76;UBERON:0001474,5.61e-58,82;UBERON:0002390,4.16e-53,98;UBERON:0003061,4.16e-53,98;UBERON:0004765,3.72e-52,90;UBERON:0002405,3.15e-50,93;UBERON:0002193,1.87e-47,108;UBERON:0001434,3.56e-46,100;UBERON:0002204,1.84e-24,167;UBERON:0003081,8.19e-23,203;UBERON:0000926,1.17e-11,315;UBERON:0004120,1.17e-11,315;UBERON:0006603,1.17e-11,315;UBERON:0002384,2.17e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,2.4065333696417,0.217010870715852,0.895661896959697,1.94336199611388,0.257575567634187,5.08893835728477,1.88937971844405,2.42584061187816,5.34586784883075,2.87817521615278,4.64559556342655,2.3015391385772,2.81776777182011,0.47296445977717,3.10271112662957,3.87290810150296,6.77132432971709,6.77672422353377,2.18324920046277,2.02251136000576,7.95818120164347,3.20929027076094,1.27867425159808,2.63881040149373,1.19678194572979,1.27867425159808,4.64334781805734,4.53908179752912,0.622822248995575,5.52747063564835,2.08593167368081,2.17188844705117,1.81619850790011,1.47311054395026,1.89877432464531,0.211255286311942,0.425208599930087,0,0.44931452458598,0.600707571366025,0,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0.984868024349589,3.97807250736704,2.0808362720422,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.763976851116555,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,1.2162378064119,2.00902836572851,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,8.97484377612075,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,1.13929437434833,0.476463550915578,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,1.9692329214317,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,1.27126825146383,0.709163045303809,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.448788222048861,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0.867798691675654,0,0,0,0,0,0.0730893170861856,0.164230914106418,0.193978032976839,0,0,0,0,0,0.586654148204409,0.160317640503067,0.640358984218058,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0.547621515567972,1.27746588066972,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.262272940674991,0,0.35857467866569,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.258565912723101,0.13223260174269,0.684347351537318,0,1.06787412567695,0,2.07119527673598,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0.255788742607303,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0,0.606965604236632,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0.11294608203896,0,1.05673990496671,0,0.218559560503957,0,0,0.235676547101626,0.392616934229891,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0.0802413666891683,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr2:219252546..219252572,+ | |||
}} |
Latest revision as of 06:39, 29 July 2015
Short description: | p@chr2:219252546..219252572, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:219252546..219252572, + |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.56e-94 | 48 |
phagocyte | 1.56e-94 | 48 |
monopoietic cell | 1.11e-78 | 59 |
monocyte | 1.11e-78 | 59 |
monoblast | 1.11e-78 | 59 |
promonocyte | 1.11e-78 | 59 |
classical monocyte | 1.68e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-78 | 42 |
macrophage dendritic cell progenitor | 6.99e-76 | 61 |
granulocyte monocyte progenitor cell | 1.39e-72 | 67 |
myeloid leukocyte | 2.45e-71 | 72 |
myeloid lineage restricted progenitor cell | 1.29e-69 | 66 |
myeloid cell | 1.80e-50 | 108 |
common myeloid progenitor | 1.80e-50 | 108 |
nongranular leukocyte | 8.82e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 6.33e-35 | 120 |
leukocyte | 4.34e-34 | 136 |
hematopoietic oligopotent progenitor cell | 3.97e-31 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-31 | 161 |
hematopoietic stem cell | 1.77e-29 | 168 |
hematopoietic cell | 1.50e-27 | 177 |
macrophage | 3.92e-17 | 6 |
mesenchymal cell | 2.94e-10 | 354 |
connective tissue cell | 6.85e-10 | 361 |
motile cell | 1.35e-08 | 386 |
multi fate stem cell | 5.07e-07 | 427 |
somatic stem cell | 8.34e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.88e-63 | 76 |
bone element | 5.61e-58 | 82 |
hematopoietic system | 4.16e-53 | 98 |
blood island | 4.16e-53 | 98 |
skeletal element | 3.72e-52 | 90 |
immune system | 3.15e-50 | 93 |
hemolymphoid system | 1.87e-47 | 108 |
skeletal system | 3.56e-46 | 100 |
musculoskeletal system | 1.84e-24 | 167 |
lateral plate mesoderm | 8.19e-23 | 203 |
mesoderm | 1.17e-11 | 315 |
mesoderm-derived structure | 1.17e-11 | 315 |
presumptive mesoderm | 1.17e-11 | 315 |
connective tissue | 2.17e-09 | 371 |