FFCP PHASE1:Hg19::chr2:219252546..219252572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:219252546..219252572,+ | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr2:219252546..219252572,+ | |description=CAGE_peak_at_chr2:219252546..219252572,+ | ||
|id=chr2:219252546..219252572,+ | |id=chr2:219252546..219252572,+ | ||
|ontology_enrichment_celltype=CL:0002194!7.24e-49!63;CL:0000576!7.24e-49!63;CL:0000040!7.24e-49!63;CL:0000559!7.24e-49!63;CL:0002009!9.02e-47!65;CL:0000766!2.48e-46!76;CL:0000557!8.36e-45!71;CL:0002057!4.36e-44!42;CL:0000860!5.82e-44!45;CL:0000839!1.20e-43!70;CL:0000763!1.64e-27!112;CL:0000049!1.64e-27!112;CL:0002087!2.99e-21!119;CL:0000738!8.81e-20!140;CL:0002031!1.35e-17!124;CL:0000037!4.08e-14!172;CL:0000566!4.08e-14!172;CL:0002032!2.60e-13!165;CL:0000837!2.60e-13!165;CL:0000988!2.51e-12!182;CL:0000235!1.21e-07!10 | |ontology_enrichment_celltype=CL:0002194!7.24e-49!63;CL:0000576!7.24e-49!63;CL:0000040!7.24e-49!63;CL:0000559!7.24e-49!63;CL:0002009!9.02e-47!65;CL:0000766!2.48e-46!76;CL:0000557!8.36e-45!71;CL:0002057!4.36e-44!42;CL:0000860!5.82e-44!45;CL:0000839!1.20e-43!70;CL:0000763!1.64e-27!112;CL:0000049!1.64e-27!112;CL:0002087!2.99e-21!119;CL:0000738!8.81e-20!140;CL:0002031!1.35e-17!124;CL:0000037!4.08e-14!172;CL:0000566!4.08e-14!172;CL:0002032!2.60e-13!165;CL:0000837!2.60e-13!165;CL:0000988!2.51e-12!182;CL:0000235!1.21e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000473;5.21e-86;39!CL:0000234;5.21e-86;39!CL:0000860;3.16e-85;33!CL:0002057;3.16e-85;33!CL:0000576;3.56e-44;48!CL:0000766;5.39e-36;69!CL:0000763;5.15e-18;100!CL:0000235;2.26e-17;6!CL:0002087;4.34e-11;104!CL:0000738;3.91e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.56e-94,48;CL:0000234,1.56e-94,48;CL:0002194,1.11e-78,59;CL:0000576,1.11e-78,59;CL:0000040,1.11e-78,59;CL:0000559,1.11e-78,59;CL:0000860,1.68e-78,42;CL:0002057,1.68e-78,42;CL:0002009,6.99e-76,61;CL:0000557,1.39e-72,67;CL:0000766,2.45e-71,72;CL:0000839,1.29e-69,66;CL:0000763,1.80e-50,108;CL:0000049,1.80e-50,108;CL:0002087,8.82e-37,115;CL:0002031,6.33e-35,120;CL:0000738,4.34e-34,136;CL:0002032,3.97e-31,161;CL:0000837,3.97e-31,161;CL:0000037,1.77e-29,168;CL:0000988,1.50e-27,177;CL:0000235,3.92e-17,6;CL:0000134,2.94e-10,354;CL:0002320,6.85e-10,361;CL:0000219,1.35e-08,386;CL:0000048,5.07e-07,427;CL:0000723,8.34e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;3.67e-59;42!CL:0000049;2.18e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.21e-41!102;UBERON:0003061!1.21e-41!102;UBERON:0002371!1.50e-37!80;UBERON:0002193!2.85e-37!112;UBERON:0001474!1.41e-33!86;UBERON:0004765!4.42e-28!101;UBERON:0001434!4.42e-28!101;UBERON:0002405!1.57e-27!115;UBERON:0003081!1.47e-12!216;UBERON:0002204!1.34e-11!167;UBERON:0000062!4.42e-10!511;UBERON:0000926!3.24e-08!448;UBERON:0004120!3.24e-08!448;UBERON:0006603!3.24e-08!448;UBERON:0000467!8.34e-08!625;UBERON:0000480!9.82e-08!626;UBERON:0000923!3.00e-07!604;UBERON:0005291!3.00e-07!604;UBERON:0006598!3.00e-07!604;UBERON:0002532!3.00e-07!604;UBERON:0002050!3.51e-07!605;UBERON:0005423!3.51e-07!605;UBERON:0000922!4.40e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.88e-63,76;UBERON:0001474,5.61e-58,82;UBERON:0002390,4.16e-53,98;UBERON:0003061,4.16e-53,98;UBERON:0004765,3.72e-52,90;UBERON:0002405,3.15e-50,93;UBERON:0002193,1.87e-47,108;UBERON:0001434,3.56e-46,100;UBERON:0002204,1.84e-24,167;UBERON:0003081,8.19e-23,203;UBERON:0000926,1.17e-11,315;UBERON:0004120,1.17e-11,315;UBERON:0006603,1.17e-11,315;UBERON:0002384,2.17e-09,371 | |||
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|short_description=p@chr2:219252546..219252572,+ | |short_description=p@chr2:219252546..219252572,+ | ||
}} | }} |
Latest revision as of 06:39, 29 July 2015
Short description: | p@chr2:219252546..219252572, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:219252546..219252572, + |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.56e-94 | 48 |
phagocyte | 1.56e-94 | 48 |
monopoietic cell | 1.11e-78 | 59 |
monocyte | 1.11e-78 | 59 |
monoblast | 1.11e-78 | 59 |
promonocyte | 1.11e-78 | 59 |
classical monocyte | 1.68e-78 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-78 | 42 |
macrophage dendritic cell progenitor | 6.99e-76 | 61 |
granulocyte monocyte progenitor cell | 1.39e-72 | 67 |
myeloid leukocyte | 2.45e-71 | 72 |
myeloid lineage restricted progenitor cell | 1.29e-69 | 66 |
myeloid cell | 1.80e-50 | 108 |
common myeloid progenitor | 1.80e-50 | 108 |
nongranular leukocyte | 8.82e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 6.33e-35 | 120 |
leukocyte | 4.34e-34 | 136 |
hematopoietic oligopotent progenitor cell | 3.97e-31 | 161 |
hematopoietic multipotent progenitor cell | 3.97e-31 | 161 |
hematopoietic stem cell | 1.77e-29 | 168 |
hematopoietic cell | 1.50e-27 | 177 |
macrophage | 3.92e-17 | 6 |
mesenchymal cell | 2.94e-10 | 354 |
connective tissue cell | 6.85e-10 | 361 |
motile cell | 1.35e-08 | 386 |
multi fate stem cell | 5.07e-07 | 427 |
somatic stem cell | 8.34e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.88e-63 | 76 |
bone element | 5.61e-58 | 82 |
hematopoietic system | 4.16e-53 | 98 |
blood island | 4.16e-53 | 98 |
skeletal element | 3.72e-52 | 90 |
immune system | 3.15e-50 | 93 |
hemolymphoid system | 1.87e-47 | 108 |
skeletal system | 3.56e-46 | 100 |
musculoskeletal system | 1.84e-24 | 167 |
lateral plate mesoderm | 8.19e-23 | 203 |
mesoderm | 1.17e-11 | 315 |
mesoderm-derived structure | 1.17e-11 | 315 |
presumptive mesoderm | 1.17e-11 | 315 |
connective tissue | 2.17e-09 | 371 |