FFCP PHASE1:Hg19::chr2:211441064..211441083,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:211441064..211441083,+ | |||
|coexpression_cluster_id=C768 | |||
|description=CAGE_peak_at_chr2:211441064..211441083,+ | |description=CAGE_peak_at_chr2:211441064..211441083,+ | ||
|id=chr2:211441064..211441083,+ | |id=chr2:211441064..211441083,+ | ||
|ontology_enrichment_celltype=CL:0002150!8.47e-10!3;CL:0000861!8.47e-10!3;CL:0000181!7.09e-08!12;CL:0000417!7.09e-08!12;CL:0000668!7.09e-08!12;CL:0000414!7.09e-08!12;CL:0000412!7.09e-08!12;CL:0000182!7.09e-08!12 | |ontology_enrichment_celltype=CL:0002150!8.47e-10!3;CL:0000861!8.47e-10!3;CL:0000181!7.09e-08!12;CL:0000417!7.09e-08!12;CL:0000668!7.09e-08!12;CL:0000414!7.09e-08!12;CL:0000412!7.09e-08!12;CL:0000182!7.09e-08!12 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.21e-27;29 | |||
|ontology_enrichment_disease=DOID:305!2.41e-09!106;DOID:0050687!1.77e-07!143 | |ontology_enrichment_disease=DOID:305!2.41e-09!106;DOID:0050687!1.77e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.95e-11,106;DOID:0050687,1.15e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.97e-27!9;UBERON:0001557!9.70e-12!19;UBERON:0002107!1.94e-08!19;UBERON:0006925!1.94e-08!19;UBERON:0008836!1.94e-08!19;UBERON:0009497!1.03e-07!25;UBERON:0000015!1.03e-07!25;UBERON:0002423!1.03e-07!25;UBERON:0006235!1.03e-07!25;UBERON:0004161!1.03e-07!25;UBERON:0004921!1.39e-07!129;UBERON:0004185!1.39e-07!129;UBERON:0008835!4.29e-07!22;UBERON:0003894!4.29e-07!22;UBERON:0001041!4.77e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.84e-75;9!UBERON:0001557;9.84e-75;9!UBERON:0000072;1.53e-19;37!UBERON:0000065;3.93e-16;44!UBERON:0002108;1.96e-07;4!UBERON:0002107;2.26e-07;19!UBERON:0006925;2.26e-07;19!UBERON:0001004;2.86e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.34e-75,9;UBERON:0001557,7.93e-35,19;UBERON:0008947,9.95e-21,38;UBERON:0003258,9.95e-21,38;UBERON:0001041,1.11e-16,87;UBERON:0000072,1.84e-16,47;UBERON:0004921,2.27e-15,118;UBERON:0000065,3.99e-14,54;UBERON:0001007,5.31e-12,145;UBERON:0001555,5.31e-12,145;UBERON:0007026,5.31e-12,145;UBERON:0004119,1.29e-10,160;UBERON:0000925,1.29e-10,160;UBERON:0006595,1.29e-10,160;UBERON:0001004,7.01e-10,74;UBERON:0001048,6.15e-08,160;UBERON:0011216,9.93e-08,223;UBERON:0002108,1.83e-07,4;UBERON:0002107,2.01e-07,19;UBERON:0006925,2.01e-07,19;UBERON:0008836,2.01e-07,19 | |||
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| ||
|short_description=p@chr2:211441064..211441083,+ | |short_description=p@chr2:211441064..211441083,+ | ||
}} | }} |
Latest revision as of 05:44, 29 July 2015
Short description: | p@chr2:211441064..211441083, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:211441064..211441083, + |
Coexpression cluster: | C768_Hepatocyte_liver_cervical_Hep2_epitheloid_large_nonsmall |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 8.34e-75 | 9 |
upper respiratory tract | 7.93e-35 | 19 |
respiratory primordium | 9.95e-21 | 38 |
endoderm of foregut | 9.95e-21 | 38 |
foregut | 1.11e-16 | 87 |
segment of respiratory tract | 1.84e-16 | 47 |
subdivision of digestive tract | 2.27e-15 | 118 |
respiratory tract | 3.99e-14 | 54 |
digestive system | 5.31e-12 | 145 |
digestive tract | 5.31e-12 | 145 |
primitive gut | 5.31e-12 | 145 |
endoderm-derived structure | 1.29e-10 | 160 |
endoderm | 1.29e-10 | 160 |
presumptive endoderm | 1.29e-10 | 160 |
respiratory system | 7.01e-10 | 74 |
primordium | 6.15e-08 | 160 |
organ system subdivision | 9.93e-08 | 223 |
small intestine | 1.83e-07 | 4 |
liver | 2.01e-07 | 19 |
digestive gland | 2.01e-07 | 19 |
liver bud | 2.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.95e-11 | 106 |
cell type cancer | 1.15e-07 | 143 |