FFCP PHASE1:Hg19::chr2:20402138..20402149,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:20402138..20402149,- | |||
|coexpression_cluster_id=C572 | |coexpression_cluster_id=C572 | ||
|description=CAGE_peak_at_chr2:20402138..20402149,- | |description=CAGE_peak_at_chr2:20402138..20402149,- | ||
|id=chr2:20402138..20402149,- | |id=chr2:20402138..20402149,- | ||
|ontology_enrichment_celltype=CL:0000066!5.38e-22!254;CL:0002076!2.77e-16!43;CL:0000223!2.12e-15!59;CL:0000220!1.37e-14!246;CL:0002321!1.49e-14!248;CL:0002368!1.26e-10!13;CL:0002202!6.58e-08!9;CL:0002632!6.58e-08!9;CL:0002159!6.85e-08!13;CL:0000221!1.28e-07!71;CL:0002077!1.73e-07!33 | |ontology_enrichment_celltype=CL:0000066!5.38e-22!254;CL:0002076!2.77e-16!43;CL:0000223!2.12e-15!59;CL:0000220!1.37e-14!246;CL:0002321!1.49e-14!248;CL:0002368!1.26e-10!13;CL:0002202!6.58e-08!9;CL:0002632!6.58e-08!9;CL:0002159!6.85e-08!13;CL:0000221!1.28e-07!71;CL:0002077!1.73e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.78e-17;42!CL:0002368;3.01e-17;13!CL:0000244;1.17e-12;4!CL:0000731;1.17e-12;4!CL:0002159;1.67e-12;14!CL:0002202;7.58e-12;9!CL:0002632;7.58e-12;9!CL:0002328;3.80e-10;3!CL:0000307;9.16e-10;3!CL:0002166;1.30e-09;3!CL:0002621;5.69e-09;3!CL:0002251;9.59e-08;20!CL:0000575;2.13e-07;2!CL:0002327;4.19e-07;4!CL:0002077;8.34e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.21e-22,42;CL:0000223,1.16e-18,58;CL:0002368,3.21e-17,13;CL:0000066,5.71e-15,253;CL:0000244,1.31e-12,4;CL:0000731,1.31e-12,4;CL:0002159,1.98e-12,14;CL:0002202,8.73e-12,9;CL:0002632,8.73e-12,9;CL:0002328,3.83e-10,3;CL:0000068,1.13e-09,3;CL:0000069,1.13e-09,3;CL:0000307,1.13e-09,3;CL:0000377,1.13e-09,3;CL:0002166,1.34e-09,3;CL:0002621,4.93e-09,3;CL:0002077,6.59e-08,34;CL:0002251,8.66e-08,20;CL:0000575,2.15e-07,2;CL:0002321,2.25e-07,250;CL:0002327,4.26e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;9.34e-11;58!CL:0000377;9.16e-10;3 | |||
|ontology_enrichment_disease=DOID:305!2.53e-09!106;DOID:0050687!2.62e-07!143 | |ontology_enrichment_disease=DOID:305!2.53e-09!106;DOID:0050687!2.62e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.45e-15!169;UBERON:0000925!1.45e-15!169;UBERON:0006595!1.45e-15!169;UBERON:0000161!3.29e-11!35;UBERON:0003102!4.38e-11!95;UBERON:0001007!4.47e-11!155;UBERON:0001555!4.47e-11!155;UBERON:0007026!4.47e-11!155;UBERON:0004921!2.44e-09!129;UBERON:0004185!2.44e-09!129;UBERON:0000077!2.85e-09!130;UBERON:0005911!6.11e-09!82;UBERON:0001004!7.09e-09!72;UBERON:0003104!7.45e-09!238;UBERON:0009142!7.45e-09!238;UBERON:0005153!6.66e-08!37;UBERON:0000475!8.34e-08!365;UBERON:0001041!3.97e-07!98;UBERON:0006554!9.64e-07!44;UBERON:0000166!9.75e-07!21 | |ontology_enrichment_uberon=UBERON:0004119!1.45e-15!169;UBERON:0000925!1.45e-15!169;UBERON:0006595!1.45e-15!169;UBERON:0000161!3.29e-11!35;UBERON:0003102!4.38e-11!95;UBERON:0001007!4.47e-11!155;UBERON:0001555!4.47e-11!155;UBERON:0007026!4.47e-11!155;UBERON:0004921!2.44e-09!129;UBERON:0004185!2.44e-09!129;UBERON:0000077!2.85e-09!130;UBERON:0005911!6.11e-09!82;UBERON:0001004!7.09e-09!72;UBERON:0003104!7.45e-09!238;UBERON:0009142!7.45e-09!238;UBERON:0005153!6.66e-08!37;UBERON:0000475!8.34e-08!365;UBERON:0001041!3.97e-07!98;UBERON:0006554!9.64e-07!44;UBERON:0000166!9.75e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.01e-11;12!UBERON:0004815;3.80e-10;3!UBERON:0002031;3.80e-10;3!UBERON:0000365;4.10e-10;5!UBERON:0001949;5.69e-09;3!UBERON:0005910;2.06e-08;6!UBERON:0001708;2.72e-07;4!UBERON:0008895;2.72e-07;4!UBERON:0001911;4.19e-07;4!UBERON:0002365;4.34e-07;31!UBERON:0002330;4.34e-07;31!UBERON:0007196;9.05e-07;15!UBERON:0001558;9.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.19e-12,160;UBERON:0000925,2.19e-12,160;UBERON:0006595,2.19e-12,160;UBERON:0004815,3.83e-10,3;UBERON:0002031,3.83e-10,3;UBERON:0003102,3.84e-10,99;UBERON:0000365,4.49e-10,5;UBERON:0001949,4.93e-09,3;UBERON:0000161,2.08e-08,36;UBERON:0005910,2.21e-08,6;UBERON:0005911,6.78e-08,82;UBERON:0001708,2.80e-07,4;UBERON:0008895,2.80e-07,4;UBERON:0002365,4.04e-07,31;UBERON:0002330,4.04e-07,31;UBERON:0001911,4.26e-07,4;UBERON:0005333,4.26e-07,4;UBERON:0008425,4.26e-07,4;UBERON:0005311,4.26e-07,4;UBERON:0001007,4.51e-07,145;UBERON:0001555,4.51e-07,145;UBERON:0007026,4.51e-07,145;UBERON:0001004,5.52e-07,74;UBERON:0007196,9.79e-07,15;UBERON:0001558,9.79e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,1.09220686065086,1.05506791291381,0,0,1.34465029290355,0.602694528023977,1.46062018077475,1.46379839637152,0,0.612002073732759,0.313454721478088,0,0.410623275218653,0,0,0,0.0787107813136792,0,0,0,4.59710612239464,5.12050061923025,7.02532619316897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.261958150995425,6.19301990097322,6.67411997011973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10531672999548,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0,0,0,0.538168907066586,0,0.423863802319124,0.900273288253207,0.206105058476878,0,0,0.168776332241266,0.389748020644795,0,0,0.484938170456436,0.710019185033229,0.201504196455281,0.508681776931463,4.05847791642923,1.90922284413584,1.14721838155602,0.121973706129595,0,0.232387885739037,0,0,0,0,0.643240938192885,2.76269842704961,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,12.6755034821831,0,2.95394953340702,0,0,0.171567810298526,3.95101027471052,0,5.02644862058154,1.38882667737794,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,2.81201501960331,2.18376766658517,3.26082723657489,2.95543124919399,5.81267877027924,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0.901029173531752,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0,0,0,0,1.62786481617433,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,1.07057393278297,0.473107245101804,0.234282829985426,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0.462629081407967,0.532685175939381,0.328508624055237,0,1.74315567689939,0.241718899183244,2.6065841139427,5.89318329189736,0.34444334449382,0.364182336013434,0.131124414959424,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0,0,1.03041011647722,0,0,1.14853107599234,0.650060246036521,0,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0.178064071293475,4.62797763010739,2.49847087574638,0.255225424989168,1.4162089319777,0,0.62962469366128,0,0,0.532306030317022,0,0.18532421910392,0,0,0,0.38126038784765,0.255897791311334,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0.354761064070598,0,0,0,0,3.46399605811843,4.02181365321472,2.17781969722645,0.941438007767792,2.15252686335615,6.73885902670502,8.42517291719684,2.75668080248351,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.246169610922139,0,0.269605053441981,0.537063524026827,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0.174919999992391,0,1.2517279311405,0.254253650292766,0,0,0,0.173624994933292,0,0,0,0,0,0,0,1.95193241990045,0.307801034015188,0,0.69169171316418,0.269272933229316,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0.995261931078505,0,0,0,0,0.104421949505455,0,0,0,0,0.391329237864179,0.242780379534093,0.394584402849391,0,0.30607276163049,0,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0.694238953340524,0.685946781900644,0.0870592065804026,0.17472666824203,0.51595809741485,0.387025325156341,0.0730893170861856,0,1.26085721434945,0,0.677942222341597,0.548167698587004,0,0,1.95551382734803,0.320635281006135,0,0,0.144090417154106,0.458146384663663,0,0,0.124252535565433,0.707082103850386,0.271808412147228,0.418411385249333,0.305994652908965,0.288950589901519,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0.472699093843342,0.412079291905832,0.741438982396034,0.196854963029498,0,0,0,0.321506296930038,0,0.83088067605837,0,0,0,1.67717343799633,1.18208560948797,0.104909176269996,0,0,0.383830394638891,0,0,0.25426853765475,1.62899880526114,0.864221491201268,1.95952416065645,0,0,1.02232813071253,0.113312091520126,1.02586563574658,1.32506888912221,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0.235265819698172,0.468334905806882,0.434763085832475,0.298509605773748,0,0,0,0,0,0,0,0.466311601748341,0.147855149989634,0.318593534327405,0,0.310525913752519,0.414706207840855,0,0,0,0,0.813741466409323,0,0,0.464033759878494,0,0,0,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| ||
|short_description=p@chr2:20402138..20402149,- | |short_description=p@chr2:20402138..20402149,- | ||
}} | }} |
Latest revision as of 05:12, 29 July 2015
Short description: | p@chr2:20402138..20402149, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20402138..20402149, - |
Coexpression cluster: | C572_Urothelial_Prostate_Keratinocyte_Corneal_Mammary_Bronchial_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.21e-22 | 42 |
endodermal cell | 1.16e-18 | 58 |
respiratory epithelial cell | 3.21e-17 | 13 |
epithelial cell | 5.71e-15 | 253 |
transitional epithelial cell | 1.31e-12 | 4 |
urothelial cell | 1.31e-12 | 4 |
general ecto-epithelial cell | 1.98e-12 | 14 |
epithelial cell of tracheobronchial tree | 8.73e-12 | 9 |
epithelial cell of lower respiratory tract | 8.73e-12 | 9 |
bronchial epithelial cell | 3.83e-10 | 3 |
duct epithelial cell | 1.13e-09 | 3 |
branched duct epithelial cell | 1.13e-09 | 3 |
tracheal epithelial cell | 1.13e-09 | 3 |
tracheoblast | 1.13e-09 | 3 |
epithelial cell of Malassez | 1.34e-09 | 3 |
gingival epithelial cell | 4.93e-09 | 3 |
ecto-epithelial cell | 6.59e-08 | 34 |
epithelial cell of alimentary canal | 8.66e-08 | 20 |
corneal epithelial cell | 2.15e-07 | 2 |
embryonic cell | 2.25e-07 | 250 |
mammary gland epithelial cell | 4.26e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.19e-12 | 160 |
endoderm | 2.19e-12 | 160 |
presumptive endoderm | 2.19e-12 | 160 |
lower respiratory tract epithelium | 3.83e-10 | 3 |
epithelium of bronchus | 3.83e-10 | 3 |
surface structure | 3.84e-10 | 99 |
urothelium | 4.49e-10 | 5 |
gingival epithelium | 4.93e-09 | 3 |
orifice | 2.08e-08 | 36 |
transitional epithelium | 2.21e-08 | 6 |
endo-epithelium | 6.78e-08 | 82 |
jaw skeleton | 2.80e-07 | 4 |
splanchnocranium | 2.80e-07 | 4 |
exocrine gland | 4.04e-07 | 31 |
exocrine system | 4.04e-07 | 31 |
mammary gland | 4.26e-07 | 4 |
mammary bud | 4.26e-07 | 4 |
mammary ridge | 4.26e-07 | 4 |
mammary placode | 4.26e-07 | 4 |
digestive system | 4.51e-07 | 145 |
digestive tract | 4.51e-07 | 145 |
primitive gut | 4.51e-07 | 145 |
respiratory system | 5.52e-07 | 74 |
tracheobronchial tree | 9.79e-07 | 15 |
lower respiratory tract | 9.79e-07 | 15 |