FFCP PHASE1:Hg19::chr2:20385376..20385391,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:20385376..20385391,- | |||
|description=CAGE_peak_at_chr2:20385376..20385391,- | |description=CAGE_peak_at_chr2:20385376..20385391,- | ||
|id=chr2:20385376..20385391,- | |id=chr2:20385376..20385391,- | ||
|ontology_enrichment_celltype=CL:0002057!1.19e-18!42;CL:0000860!5.02e-17!45;CL:0002009!9.71e-17!65;CL:0000557!9.27e-15!71;CL:0002194!2.56e-14!63;CL:0000576!2.56e-14!63;CL:0000040!2.56e-14!63;CL:0000559!2.56e-14!63;CL:0000839!2.75e-12!70;CL:0000766!7.47e-11!76;CL:0000763!4.58e-07!112;CL:0000049!4.58e-07!112 | |ontology_enrichment_celltype=CL:0002057!1.19e-18!42;CL:0000860!5.02e-17!45;CL:0002009!9.71e-17!65;CL:0000557!9.27e-15!71;CL:0002194!2.56e-14!63;CL:0000576!2.56e-14!63;CL:0000040!2.56e-14!63;CL:0000559!2.56e-14!63;CL:0000839!2.75e-12!70;CL:0000766!7.47e-11!76;CL:0000763!4.58e-07!112;CL:0000049!4.58e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.28e-25;33!CL:0002057;6.28e-25;33!CL:0000473;1.23e-19;39!CL:0000234;1.23e-19;39!CL:0000766;6.07e-13;69!CL:0000576;2.10e-11;48!CL:0000054;6.14e-08;2!CL:0000137;6.14e-08;2!CL:0000092;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.00e-19,42;CL:0002057,2.00e-19,42;CL:0000473,6.53e-17,48;CL:0000234,6.53e-17,48;CL:0002194,6.65e-17,59;CL:0000576,6.65e-17,59;CL:0000040,6.65e-17,59;CL:0000559,6.65e-17,59;CL:0002009,2.49e-16,61;CL:0000839,4.83e-15,66;CL:0000557,8.28e-15,67;CL:0000766,9.91e-14,72;CL:0000763,7.13e-09,108;CL:0000049,7.13e-09,108;CL:0002087,2.82e-08,115;CL:0002031,6.82e-08,120;CL:0000054,7.52e-08,2;CL:0000137,7.52e-08,2;CL:0000092,7.52e-08,2;CL:0000738,7.53e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-17;42 | |||
|ontology_enrichment_disease=DOID:1749!8.72e-10!14 | |ontology_enrichment_disease=DOID:1749!8.72e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:0060085;1.40e-14;1!DOID:3165;1.40e-14;1!DOID:0060121;1.40e-14;1!DOID:2438;1.40e-14;1!DOID:4418;1.40e-14;1!DOID:200;6.14e-08;2!DOID:4305;6.14e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.11e-14,1;DOID:3165,2.11e-14,1;DOID:0060121,2.11e-14,1;DOID:2438,2.11e-14,1;DOID:4418,2.11e-14,1;DOID:200,7.52e-08,2;DOID:4305,7.52e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.33e-12!80;UBERON:0001474!4.78e-11!86;UBERON:0004765!3.43e-10!101;UBERON:0001434!3.43e-10!101;UBERON:0002390!2.44e-08!102;UBERON:0003061!2.44e-08!102;UBERON:0002294!2.63e-08!7;UBERON:0001173!2.63e-08!7;UBERON:0004912!2.63e-08!7;UBERON:0000365!6.12e-08!5;UBERON:0002193!4.58e-07!112;UBERON:0002405!9.88e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.73e-13,76;UBERON:0001474,5.82e-12,82;UBERON:0004765,7.97e-11,90;UBERON:0002405,1.90e-10,93;UBERON:0002390,7.17e-10,98;UBERON:0003061,7.17e-10,98;UBERON:0001434,1.18e-09,100;UBERON:0002193,7.13e-09,108 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,1.13362783106643,0,0.929716147622738,2.05583944010913,1.23882548358041,0.28769239232215,0.512321413058201,0.47296445977717,1.03423704220986,1.29096936716765,1.35426486594342,0.188242339542605,1.63743690034707,0.449446968890169,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,1.52032191293582,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.316654886678627,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0.495854746082934,0.576570202095319,1.27612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.188287601553558,0.86101074534246,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0.685946781900644,0,0,0,0,0,0,0,0,0,0.685209623233754,1.19228767021794,0,0,0.400794101257669,0.426905989478705,0,0,0,0,0,0.49701014226173,0,0.407712618220842,0.523014231561666,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.999843263696853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07453304648892,0,0,0.176689145945881,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59441995455846,0,0.183428598521679,0.808679663052368,0,0,0,0,1.81534561833168,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:20385376..20385391,- | |short_description=p@chr2:20385376..20385391,- | ||
}} | }} |
Latest revision as of 05:12, 29 July 2015
Short description: | p@chr2:20385376..20385391, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20385376..20385391, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.00e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.00e-19 | 42 |
defensive cell | 6.53e-17 | 48 |
phagocyte | 6.53e-17 | 48 |
monopoietic cell | 6.65e-17 | 59 |
monocyte | 6.65e-17 | 59 |
monoblast | 6.65e-17 | 59 |
promonocyte | 6.65e-17 | 59 |
macrophage dendritic cell progenitor | 2.49e-16 | 61 |
myeloid lineage restricted progenitor cell | 4.83e-15 | 66 |
granulocyte monocyte progenitor cell | 8.28e-15 | 67 |
myeloid leukocyte | 9.91e-14 | 72 |
myeloid cell | 7.13e-09 | 108 |
common myeloid progenitor | 7.13e-09 | 108 |
nongranular leukocyte | 2.82e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 6.82e-08 | 120 |
bone matrix secreting cell | 7.52e-08 | 2 |
osteocyte | 7.52e-08 | 2 |
osteoclast | 7.52e-08 | 2 |
leukocyte | 7.53e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.73e-13 | 76 |
bone element | 5.82e-12 | 82 |
skeletal element | 7.97e-11 | 90 |
immune system | 1.90e-10 | 93 |
hematopoietic system | 7.17e-10 | 98 |
blood island | 7.17e-10 | 98 |
skeletal system | 1.18e-09 | 100 |
hemolymphoid system | 7.13e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.11e-14 | 1 |
skin benign neoplasm | 2.11e-14 | 1 |
integumentary system benign neoplasm | 2.11e-14 | 1 |
dermis tumor | 2.11e-14 | 1 |
cutaneous fibrous histiocytoma | 2.11e-14 | 1 |
giant cell tumor | 7.52e-08 | 2 |
bone giant cell tumor | 7.52e-08 | 2 |