FFCP PHASE1:Hg19::chr2:200324942..200324949,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:200324942..200324949,+ to FFCP PHASE1:Hg19::chr2:200324942..200324949,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:200324942..200324949,+ | |||
|description=CAGE_peak_at_chr2:200324942..200324949,+ | |||
|id=chr2:200324942..200324949,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.43e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0000817;3.20e-08;1!CL:1001319;3.20e-08;1!CL:1000600;3.20e-08;1!CL:0000083;5.06e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,3.45e-08,4;CL:1001319,5.82e-08,1;CL:1000600,5.82e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.20e-08;1 | |||
|ontology_enrichment_disease=DOID:14566!7.10e-33!239;DOID:0050687!1.03e-32!143;DOID:162!1.16e-32!235;DOID:305!1.11e-29!106;DOID:0050686!2.16e-12!137;DOID:1749!2.01e-10!14;DOID:7!1.78e-08!39;DOID:3119!4.38e-07!14;DOID:299!8.16e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3112;3.20e-08;1!DOID:1749;4.80e-08;14!DOID:1793;5.06e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.42e-09,235;DOID:14566,1.01e-08,239;DOID:305,1.23e-08,106;DOID:3112,2.02e-08,1;DOID:1749,2.53e-08,14;DOID:1793,3.45e-08,4;DOID:0050687,4.50e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000344!6.65e-08!12;UBERON:0000060!4.62e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;3.20e-08;1!UBERON:0001256;3.20e-08;1!UBERON:0001259;3.20e-08;1!UBERON:0003343;8.22e-08;4!UBERON:0004785;8.22e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,4.90e-08,4;UBERON:0004785,4.90e-08,4;UBERON:0004645,5.82e-08,1;UBERON:0001256,5.82e-08,1;UBERON:0001259,5.82e-08,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0.576175924479999,0,0.624320153660641,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0.757301322732344,0,0,1.06502877754984,0,0.169560592310488,0,0,0,0.121973706129595,0,0,0.207322110030741,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,1.32845119707087,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.929683027679674,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.447749509444357,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0.308097234229289,0.460511024178389,0.137836572484531,0.214840489736547,0,0.255679882248303,0.0890320356467374,0,0,0.127612712494584,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0,0,0,0,0.699869440489966,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0,1.00988449083511,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0.481764225311099,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.561421621224659,0,0,0.222886768554957,0.852408440419239,0,0,0,0,0,0.779160935160341,1.15362711958732,0.211125408127993,0,0,0,0.20453736500431,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,1.13697999995054,0,1.82069517256799,0.508507300585533,0.472775363535873,0.344743373241465,0,0.173624994933292,0.885741385813839,0,0,0,0,0,0.32681539055697,0,0,0.455768223388005,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0.332423363800313,0,0.19606253431774,0,3.41556718903533,0.158936578980379,1.05499032264014,0.163232808159148,0.706765357169704,0.432777279484182,0,0,0,0,0,0,0.067401132980677,0,0,0,0.782658475728359,1.94224303627274,0,0,0,0,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0,0.277349346026277,0,0.0979923974143777,0.261177619741208,0,0.51595809741485,0,0.0730893170861856,0,0.0969890164884194,0,0,0.685209623233754,0.993573058514948,0,0,0.320635281006135,0,0.39961921916426,0.576361668616424,0.229073192331831,0.686379991447858,2.16082196982225,0.124252535565433,0.942776138467182,0.135904206073614,0.418411385249333,1.22397861163586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0.422401346077626,0.537862017998534,0.191915197319445,0,0,0,0,0,0,0,0.985110248992068,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,1.91502377331055,0.544017803369474,0,0,0,0.157054096250234,0,0.366078794705889,0,0.573409195690071,0,0.0620964029413835,0.138348634936231,1.49976489554528,1.81978941049977,0.285465333544967,0,0,0,0.597019211547496,1.40227985908335,1.10961172300523,0.189403005275089,0,0.889811221596536,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,2.44122439922797,0.181848659202559,0.107410557042488,0.464033759878494,0,0.800055529326307,0.343395705182793,0,0,0.192619830407303,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0.578742114812744,0.168942440653073,0.256241518587947,0.345430341731199,0.303859956177382,0,0,0,0,0,0.245772908753719,0.845248493434508,0,0.213383459388282,0,0,0.736423801007363,0,0,0,0,2.98805289526203,0,0.169732529954025,0,0.371807292777007,0,0,0,0,0,1.2249819094128,0,0,0,0.205116364240755,0.756215088665154,0,0,0,0.490738592505128,1.88751557356385,0.366857197043358,1.73288499225507,0.762764190934334,0,0,0,0,0,0.261906694481422,1.80149109261106,0.887136517302272,0,0,0,0,0.546974809018219,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0.709163045303809,1.55723962648897,0,0,0,0,0.647782773655864,0.47775168788705,0,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0.68732060563215,0,0,0.111855431797792,0.294450700845729,0.121917924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| ||
|short_description=p@chr2:200324942..200324949,+ | |||
}} | }} |
Latest revision as of 04:48, 29 July 2015
Short description: | p@chr2:200324942..200324949, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:200324942..200324949, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 3.45e-08 | 4 |
bladder cell | 5.82e-08 | 1 |
lower urinary tract cell | 5.82e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 4.90e-08 | 4 |
respiratory system mucosa | 4.90e-08 | 4 |
urinary bladder urothelium | 5.82e-08 | 1 |
wall of urinary bladder | 5.82e-08 | 1 |
mucosa of urinary bladder | 5.82e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.42e-09 | 235 |
disease of cellular proliferation | 1.01e-08 | 239 |
carcinoma | 1.23e-08 | 106 |
papillary adenocarcinoma | 2.02e-08 | 1 |
squamous cell carcinoma | 2.53e-08 | 14 |
pancreatic cancer | 3.45e-08 | 4 |
cell type cancer | 4.50e-08 | 143 |