FFCP PHASE1:Hg19::chr2:189867707..189867750,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:189867707..189867750,- | |||
|coexpression_cluster_id=C1051 | |coexpression_cluster_id=C1051 | ||
|description=CAGE_peak_at_chr2:189867707..189867750,- | |description=CAGE_peak_at_chr2:189867707..189867750,- | ||
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|ontology_enrichment_celltype=CL:0000055!5.60e-29!180;CL:0000057!1.15e-19!75;CL:0000187!9.14e-17!54;CL:0000680!1.00e-16!57;CL:0000056!1.00e-16!57;CL:0000355!1.00e-16!57;CL:0000183!4.23e-16!59;CL:0000393!1.38e-13!60;CL:0000211!1.38e-13!60;CL:0000048!5.50e-12!430;CL:0000723!3.45e-11!436;CL:0000192!3.65e-11!42;CL:0000514!3.65e-11!42;CL:0000034!9.23e-11!444;CL:0002494!6.87e-08!16;CL:0002334!8.19e-08!12;CL:0002570!2.82e-07!8;CL:0000359!3.57e-07!32;CL:0000499!9.16e-07!27 | |ontology_enrichment_celltype=CL:0000055!5.60e-29!180;CL:0000057!1.15e-19!75;CL:0000187!9.14e-17!54;CL:0000680!1.00e-16!57;CL:0000056!1.00e-16!57;CL:0000355!1.00e-16!57;CL:0000183!4.23e-16!59;CL:0000393!1.38e-13!60;CL:0000211!1.38e-13!60;CL:0000048!5.50e-12!430;CL:0000723!3.45e-11!436;CL:0000192!3.65e-11!42;CL:0000514!3.65e-11!42;CL:0000034!9.23e-11!444;CL:0002494!6.87e-08!16;CL:0002334!8.19e-08!12;CL:0002570!2.82e-07!8;CL:0000359!3.57e-07!32;CL:0000499!9.16e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.00e-10;12!CL:0002570;1.33e-09;8!CL:0000134;5.67e-09;55!CL:0000499;7.78e-09;28!CL:0000723;1.82e-08;61!CL:0000187;2.22e-08;55!CL:0002494;3.95e-08;16!CL:0000048;9.55e-08;58!CL:0000393;3.09e-07;61!CL:0000211;3.09e-07;61!CL:0000136;5.19e-07;13 | |ontology_enrichment_celltype_v019=CL:0002334;1.00e-10;12!CL:0002570;1.33e-09;8!CL:0000134;5.67e-09;55!CL:0000499;7.78e-09;28!CL:0000723;1.82e-08;61!CL:0000187;2.22e-08;55!CL:0002494;3.95e-08;16!CL:0000048;9.55e-08;58!CL:0000393;3.09e-07;61!CL:0000211;3.09e-07;61!CL:0000136;5.19e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.86e-16,76;CL:0000048,6.65e-16,427;CL:0000187,2.42e-15,55;CL:0000723,3.27e-15,433;CL:0000034,2.53e-14,441;CL:0000680,4.98e-14,58;CL:0000056,4.98e-14,58;CL:0000355,4.98e-14,58;CL:0000393,7.42e-13,61;CL:0000211,7.42e-13,61;CL:0002334,1.00e-10,12;CL:0002570,1.04e-09,8;CL:0002320,2.22e-09,361;CL:0000192,3.94e-09,43;CL:0000514,3.94e-09,43;CL:0000499,8.15e-09,28;CL:0000136,2.09e-08,15;CL:0002494,2.46e-08,16;CL:0000134,4.79e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000355;3.38e-07;58 | |ontology_enrichment_development_v019=CL:0000355;3.38e-07;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.83e-18!83;UBERON:0002329!8.83e-18!83;UBERON:0003077!8.83e-18!83;UBERON:0003059!8.83e-18!83;UBERON:0007282!8.83e-18!83;UBERON:0009618!8.83e-18!83;UBERON:0007285!8.83e-18!83;UBERON:0001134!4.86e-17!61;UBERON:0002036!4.86e-17!61;UBERON:0003082!4.86e-17!61;UBERON:0004290!7.40e-17!70;UBERON:0002385!1.04e-16!63;UBERON:0001015!1.04e-16!63;UBERON:0000383!1.04e-16!63;UBERON:0000486!9.19e-14!82;UBERON:0001013!9.97e-10!14;UBERON:0005256!1.05e-09!143;UBERON:0004872!5.14e-09!84;UBERON:0000948!7.03e-08!24;UBERON:0005498!7.03e-08!24;UBERON:0004140!7.03e-08!24;UBERON:0009881!7.03e-08!24;UBERON:0004141!7.03e-08!24;UBERON:0003084!7.03e-08!24;UBERON:0007005!7.03e-08!24;UBERON:0004139!7.03e-08!24;UBERON:0004291!7.03e-08!24;UBERON:0007100!8.13e-08!27;UBERON:0000478!3.69e-07!24 | |ontology_enrichment_uberon=UBERON:0000914!8.83e-18!83;UBERON:0002329!8.83e-18!83;UBERON:0003077!8.83e-18!83;UBERON:0003059!8.83e-18!83;UBERON:0007282!8.83e-18!83;UBERON:0009618!8.83e-18!83;UBERON:0007285!8.83e-18!83;UBERON:0001134!4.86e-17!61;UBERON:0002036!4.86e-17!61;UBERON:0003082!4.86e-17!61;UBERON:0004290!7.40e-17!70;UBERON:0002385!1.04e-16!63;UBERON:0001015!1.04e-16!63;UBERON:0000383!1.04e-16!63;UBERON:0000486!9.19e-14!82;UBERON:0001013!9.97e-10!14;UBERON:0005256!1.05e-09!143;UBERON:0004872!5.14e-09!84;UBERON:0000948!7.03e-08!24;UBERON:0005498!7.03e-08!24;UBERON:0004140!7.03e-08!24;UBERON:0009881!7.03e-08!24;UBERON:0004141!7.03e-08!24;UBERON:0003084!7.03e-08!24;UBERON:0007005!7.03e-08!24;UBERON:0004139!7.03e-08!24;UBERON:0004291!7.03e-08!24;UBERON:0007100!8.13e-08!27;UBERON:0000478!3.69e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.91e-13;14!UBERON:0002385;6.29e-08;31!UBERON:0001015;6.29e-08;31!UBERON:0000383;6.29e-08;31!UBERON:0004905;7.11e-08;8!UBERON:0000982;7.11e-08;8!UBERON:0004770;7.11e-08;8!UBERON:0004457;3.68e-07;9!UBERON:0000042;3.68e-07;9!UBERON:0011135;8.49e-07;5!UBERON:0002216;8.49e-07;5!UBERON:0011134;8.49e-07;5!UBERON:0002209;8.49e-07;5!UBERON:0002213;8.49e-07;5!UBERON:0007844;8.49e-07;5!UBERON:0011138;8.49e-07;5!UBERON:0001130;8.49e-07;5!UBERON:0001066;8.49e-07;5!UBERON:0001468;8.49e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001013;1.91e-13;14!UBERON:0002385;6.29e-08;31!UBERON:0001015;6.29e-08;31!UBERON:0000383;6.29e-08;31!UBERON:0004905;7.11e-08;8!UBERON:0000982;7.11e-08;8!UBERON:0004770;7.11e-08;8!UBERON:0004457;3.68e-07;9!UBERON:0000042;3.68e-07;9!UBERON:0011135;8.49e-07;5!UBERON:0002216;8.49e-07;5!UBERON:0011134;8.49e-07;5!UBERON:0002209;8.49e-07;5!UBERON:0002213;8.49e-07;5!UBERON:0007844;8.49e-07;5!UBERON:0011138;8.49e-07;5!UBERON:0001130;8.49e-07;5!UBERON:0001066;8.49e-07;5!UBERON:0001468;8.49e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.66e-15,62;UBERON:0002036,6.66e-15,62;UBERON:0003082,6.66e-15,62;UBERON:0002385,4.18e-14,64;UBERON:0001015,4.18e-14,64;UBERON:0000383,4.18e-14,64;UBERON:0007524,8.54e-14,73;UBERON:0002329,1.48e-13,71;UBERON:0003059,1.48e-13,71;UBERON:0007282,1.48e-13,71;UBERON:0004290,1.48e-13,71;UBERON:0009618,1.48e-13,71;UBERON:0001013,1.84e-13,14;UBERON:0003077,3.24e-13,72;UBERON:0007285,3.24e-13,72;UBERON:0000486,6.55e-12,83;UBERON:0007503,2.23e-11,78;UBERON:0003104,5.65e-11,160;UBERON:0009142,5.65e-11,160;UBERON:0005256,1.56e-09,122;UBERON:0002384,2.09e-09,371;UBERON:0004905,7.41e-08,8;UBERON:0000982,7.41e-08,8;UBERON:0004770,7.41e-08,8;UBERON:0000948,1.73e-07,24;UBERON:0005498,1.73e-07,24;UBERON:0004140,1.73e-07,24;UBERON:0009881,1.73e-07,24;UBERON:0004141,1.73e-07,24;UBERON:0003084,1.73e-07,24;UBERON:0007005,1.73e-07,24;UBERON:0004139,1.73e-07,24;UBERON:0004291,1.73e-07,24;UBERON:0000490,2.61e-07,148;UBERON:0000926,4.94e-07,315;UBERON:0004120,4.94e-07,315;UBERON:0006603,4.94e-07,315;UBERON:0004872,5.48e-07,83;UBERON:0011135,8.17e-07,5;UBERON:0002216,8.17e-07,5;UBERON:0011134,8.17e-07,5;UBERON:0002209,8.17e-07,5;UBERON:0002213,8.17e-07,5;UBERON:0005856,8.17e-07,5;UBERON:0005866,8.17e-07,5;UBERON:0005863,8.17e-07,5;UBERON:0007844,8.17e-07,5;UBERON:0011138,8.17e-07,5;UBERON:0001130,8.17e-07,5;UBERON:0001066,8.17e-07,5;UBERON:0001468,8.17e-07,5 | |||
|phase1_expression=2.18014055124668,5.56661362116556,2.11431606143957,11.0080628188443,21.4541325325098,16.574431957907,7.59899634504932,1.26343974685366,2.08948502559871,0,0,1.52908960491121,0.791300934685361,5.44571953024205,4.30816588446291,2.01697543935533,1.20538905604795,2.92124036154949,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,8.04841031644363,3.70801429346238,6.14446559053763,2.00535164254356,7.9665585428453,0,6.8128881842369,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94549513051573,1.51956613997496,1.58891016975863,12.6208113129478,1.77334191099179,3.36406560085384,0,1.72667283892012,0.933633106199299,2.55950276932407,2.7788523529288,0.605429710579726,4.60940739583999,0.468642863667593,0,0,0.448346041655403,0.469737994575059,0,0.421352420106746,0.61246251376468,0.122834317311768,0.516628905878827,1.18800285728205,3.4617370098998,0,1.43723628363248,0.168336113954066,0.250237039743928,0,0.438977620880838,1.83892677479412,0.901428353439581,2.94923676216055,1.07633781413317,1.70845911054854,2.96704661623387,3.00091096084402,1.03052529238439,4.3798891807757,2.04728541964749,0.506328996723799,0.389748020644795,3.02920529092937,2.02509777013059,2.90962902273861,1.77504796258307,0.302256294682921,0.847802961552438,0,0,0,0,0,0.348581828608555,0.10366105501537,0,0,0,4.5026865673502,1.38134921352481,3.71494342425583,2.16563844500876,0.118306800039844,0,0,0,0.435758888184812,0,0,0,0,0,0,2.8810180793198,5.88034845542168,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.36669142910475,1.03417372606222,7.15312891703765,3.381211010224,1.59562869950922,0,0.257207374262142,0,0,12.1531294609425,21.1622426102663,0,4.56030658011229,16.7034215908997,7.12756685640086,4.22015127883421,0,2.0994328148232,0,0,0,3.59437283237374,6.89171615004683,0,0.723906533337896,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,3.92612773501248,4.00136416847742,2.71265023699736,14.7659311686873,8.74302045106093,5.67728694122165,0.585707074963566,0,0,1.03473071292505,0,0,1.12948698808508,1.37060810223918,3.0882908142977,0,0,0,0.909382714338778,3.32870879020994,3.62868351995616,2.48107807818777,1.07423381301644,5.61320188866147,3.07533958213682,0,4.82561763430822,5.93672265779964,3.23840356985577,2.48586415438378,1.8067974323038,2.59627214591811,8.8319887629569,0,0,0,2.87036120411517,5.64482620820823,3.54035920390445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,8.03419649220798,1.06337790121334,2.46477787383431,4.29810289233163,1.7918754422989,3.43744783578476,2.90033387828457,0.596586391912706,9.5264278142009,0,0,0,0,1.39453664789186,8.81474571125792,0.6970372701606,2.7723022215848,0,0,0.55597265731176,0,1.116475108079,0,3.0500831027812,0,0.42793898803392,0.95460974377781,0,3.41757669408298,5.4907405947211,2.5918728516051,0,1.58510321173008,1.26377536871694,0.48763373908959,7.06769119930725,1.05650146756755,3.27599787379166,11.7366508521582,2.26016233240486,0,2.65375590096488,1.31535265576129,2.31510213706675,1.9676842561399,0.608731130888112,0,0.845086807596724,1.57752487424457,5.1089501326823,0,0.709522128141196,4.01104507065562,10.8667314676768,0,0.699869440489966,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,5.93929361665277,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0.615602068030377,1.13942055847001,0,0,0,0.638002319463839,0.641183153813036,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,4.27721101453538,0,0,0,0,4.81546588379273,0,0,0,0,0,4.83962864194656,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0.0882561266915003,5.42353777873278,0,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0.543616824294456,0.627617077873999,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.399358000997982,0.429226048136571,0,1.07493555978762,4.32359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.577000469484979,0,0,0,0,0,0,1.62899880526114,0.864221491201268,1.63293680054705,0,0,2.89659637035217,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,4.6268988894931,2.80455971816669,4.43844689202091,0.378806010550178,1.50940741051545,0.889811221596536,0.915360273587694,3.93200401784422,4.50767881690063,1.77426179987561,0.63718706865481,0.449803112163605,1.70789252563885,0.829412415681711,3.45594228925393,1.5652351854352,19.8340043876328,9.52013030421988,0,2.18218391043071,3.00749559718968,0.464033759878494,1.19428766609585,0.800055529326307,2.74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| ||
|short_description=p@chr2:189867707..189867750,- | |short_description=p@chr2:189867707..189867750,- | ||
}} | }} |
Latest revision as of 04:16, 29 July 2015
Short description: | p@chr2:189867707..189867750, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:189867707..189867750, - |
Coexpression cluster: | C1051_umbilical_tenocyte_Mesenchymal_mesenchymal_Olfactory_Adipocyte_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.86e-16 | 76 |
multi fate stem cell | 6.65e-16 | 427 |
muscle cell | 2.42e-15 | 55 |
somatic stem cell | 3.27e-15 | 433 |
stem cell | 2.53e-14 | 441 |
muscle precursor cell | 4.98e-14 | 58 |
myoblast | 4.98e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.98e-14 | 58 |
electrically responsive cell | 7.42e-13 | 61 |
electrically active cell | 7.42e-13 | 61 |
preadipocyte | 1.00e-10 | 12 |
mesenchymal stem cell of adipose | 1.04e-09 | 8 |
connective tissue cell | 2.22e-09 | 361 |
smooth muscle cell | 3.94e-09 | 43 |
smooth muscle myoblast | 3.94e-09 | 43 |
stromal cell | 8.15e-09 | 28 |
fat cell | 2.09e-08 | 15 |
cardiocyte | 2.46e-08 | 16 |
mesenchymal cell | 4.79e-07 | 354 |