FFCP PHASE1:Hg19::chr2:165701498..165701506,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:165701498..165701506,+ | |||
|coexpression_cluster_id=C1882 | |||
|description=CAGE_peak_at_chr2:165701498..165701506,+ | |||
|id=chr2:165701498..165701506,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.22e-09;6!CL:0002255;1.22e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.22e-09,6;CL:0002255,1.22e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;2.94e-11;5!DOID:3001;1.22e-09;6!DOID:120;1.98e-08;27!DOID:193;6.44e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.94e-11,5;DOID:3001,1.22e-09,6;DOID:120,1.98e-08,27;DOID:193,6.44e-08,29 | |||
|ontology_enrichment_uberon=UBERON:0001896!1.91e-21!3;UBERON:0005290!1.91e-21!3;UBERON:0010096!1.91e-21!3;UBERON:0002298!3.16e-21!8;UBERON:0007023!4.08e-12!115;UBERON:0003076!2.76e-11!15;UBERON:0003057!2.76e-11!15;UBERON:0005743!1.21e-10!86;UBERON:0001049!3.58e-10!57;UBERON:0005068!3.58e-10!57;UBERON:0006241!3.58e-10!57;UBERON:0007135!3.58e-10!57;UBERON:0006331!7.13e-10!3;UBERON:0001017!1.57e-09!82;UBERON:0000073!1.97e-09!94;UBERON:0001016!1.97e-09!94;UBERON:0004733!2.35e-09!12;UBERON:0002028!2.35e-09!12;UBERON:0007277!2.35e-09!12;UBERON:0003075!4.01e-09!86;UBERON:0007284!4.01e-09!86;UBERON:0004732!1.21e-08!13;UBERON:0002346!1.25e-08!90;UBERON:0002702!1.31e-08!1;UBERON:0003112!3.83e-08!1;UBERON:0000032!3.83e-08!1;UBERON:0005253!3.83e-08!1;UBERON:0003128!3.83e-08!1;UBERON:0002241!3.83e-08!1;UBERON:0001703!3.83e-08!1;UBERON:0004761!3.83e-08!1;UBERON:0009617!3.83e-08!1;UBERON:0002038!4.41e-08!1;UBERON:0009661!4.41e-08!1;UBERON:0000955!5.65e-08!69;UBERON:0006238!5.65e-08!69;UBERON:0002616!6.76e-08!59;UBERON:0002308!3.05e-07!9;UBERON:0000125!3.05e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.18e-26;2!UBERON:0002757;9.18e-26;2!UBERON:0010134;9.18e-26;2!UBERON:0005408;9.18e-26;2!UBERON:0001899;9.18e-26;2!UBERON:0003296;1.29e-13;4!UBERON:0010133;1.29e-13;4!UBERON:0002784;1.29e-13;4!UBERON:0000995;9.17e-13;17!UBERON:0003975;4.07e-12;18!UBERON:0004175;1.53e-10;21!UBERON:0000002;1.32e-09;6!UBERON:0001560;1.32e-09;6!UBERON:0001894;2.35e-08;7!UBERON:0003134;3.36e-07;33!UBERON:0003100;3.36e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0000995,1.53e-10,21;UBERON:0005795,4.14e-10,22;UBERON:0003975,4.14e-10,22;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6;UBERON:0004175,5.06e-09,25;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0.219385397153973,0,4.74040730547251,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82289592692358,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67939404817274,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0.573409195690071,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3451348888753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.219881033490858,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:165701498..165701506,+ | |||
}} |
Latest revision as of 02:04, 29 July 2015
Short description: | p@chr2:165701498..165701506, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:165701498..165701506, + |
Coexpression cluster: | C1882_endometrial_cervical_kidney_pineal_carcinoid_rectal_medulla |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.22e-09 | 6 |
stromal cell of endometrium | 1.22e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
uterus | 1.53e-10 | 21 |
embryonic uterus | 4.14e-10 | 22 |
internal female genitalia | 4.14e-10 | 22 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
internal genitalia | 5.06e-09 | 25 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.94e-11 | 5 |
female reproductive endometrioid cancer | 1.22e-09 | 6 |
female reproductive organ cancer | 1.98e-08 | 27 |
reproductive organ cancer | 6.44e-08 | 29 |