FFCP PHASE1:Hg19::chr2:133025802..133025846,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:133025802..133025846,- | |||
|coexpression_cluster_id=C171 | |||
|description=CAGE_peak_at_chr2:133025802..133025846,- | |||
|id=chr2:133025802..133025846,- | |||
|ontology_enrichment_celltype=CL:0002322!8.51e-17!5;CL:0000047!1.94e-14!8;CL:0002319!8.40e-10!25;CL:0000133!2.26e-09!59;CL:0000540!3.11e-09!6;CL:0000031!3.11e-09!6;CL:0000404!3.11e-09!6;CL:0000039!1.09e-07!7;CL:0000586!1.09e-07!7;CL:0000221!3.20e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.15e-45;5!CL:0002321;1.86e-23;15!CL:0000540;3.04e-22;6!CL:0000404;3.04e-22;6!CL:0002319;2.54e-13;25!CL:0000039;4.76e-09;7!CL:0000586;4.76e-09;7!CL:0000123;1.20e-08;2!CL:0000242;1.20e-08;2!CL:0000047;2.48e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.24e-45,5;CL:0000047,7.85e-29,8;CL:0000540,3.04e-22,6;CL:0000031,3.04e-22,6;CL:0000404,3.04e-22,6;CL:0000133,3.12e-14,59;CL:0002319,2.61e-13,25;CL:0000221,1.31e-11,72;CL:0000039,4.39e-09,7;CL:0000586,4.39e-09,7;CL:0000242,1.20e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000031;3.04e-22;6!CL:0000133;2.52e-09;59 | |||
|ontology_enrichment_disease=DOID:3095!5.59e-08!22;DOID:2994!5.59e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.54e-10;22!DOID:2994;1.54e-10;22!DOID:3193;2.48e-08;2!DOID:962;2.48e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.66e-10,22;DOID:2994,1.66e-10,22;DOID:3193,3.08e-08,2;DOID:962,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003135!3.43e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;2.48e-08;2!UBERON:0000473;5.00e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.08e-08,2;UBERON:0000473,4.66e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46368447355514,3.04818467139416,1.97529702878181,0.725627385107593,1.51392510525377,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3758161177654,3.57602535152808,2.07720169014593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,0,0,13.9124187466392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0.107824811396682,0.471797825567689,0,0,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20192129160065,0,0.305966489225945,1.87052183685892,2.57305718697566,0.752122617877125,0,0,0,0.103432995861895,0,0,0,0.248298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:133025802..133025846,- | |||
}} |
Latest revision as of 00:24, 29 July 2015
Short description: | p@chr2:133025802..133025846, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:133025802..133025846, - |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.24e-45 | 5 |
neuronal stem cell | 7.85e-29 | 8 |
neuron | 3.04e-22 | 6 |
neuroblast | 3.04e-22 | 6 |
electrically signaling cell | 3.04e-22 | 6 |
neurectodermal cell | 3.12e-14 | 59 |
neural cell | 2.61e-13 | 25 |
ectodermal cell | 1.31e-11 | 72 |
germ line cell | 4.39e-09 | 7 |
germ cell | 4.39e-09 | 7 |
Merkel cell | 1.20e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.08e-08 | 2 |
testis | 4.66e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.66e-10 | 22 |
germ cell cancer | 1.66e-10 | 22 |
peripheral nerve sheath neoplasm | 3.08e-08 | 2 |
neurofibroma | 3.08e-08 | 2 |