FFCP PHASE1:Hg19::chr22:48819856..48819861,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:48819856..48819861,+ | |||
|coexpression_cluster_id=C2330 | |coexpression_cluster_id=C2330 | ||
|description=CAGE_peak_at_chr22:48819856..48819861,+ | |description=CAGE_peak_at_chr22:48819856..48819861,+ | ||
|id=chr22:48819856..48819861,+ | |id=chr22:48819856..48819861,+ | ||
|ontology_enrichment_celltype=CL:0002620!3.30e-40!23;CL:0000057!2.38e-29!75;CL:0000055!4.53e-16!180;CL:0002580!4.48e-15!3;CL:0000136!7.53e-15!15;CL:0002617!1.86e-10!2;CL:0000219!2.16e-09!390;CL:0000134!2.79e-09!358;CL:0002320!5.81e-09!365;CL:0000048!6.52e-08!430;CL:0000723!1.07e-07!436;CL:0000034!2.02e-07!444;CL:0002615!3.02e-07!3;CL:0000135!3.76e-07!3;CL:0000386!3.76e-07!3;CL:0000388!3.76e-07!3 | |ontology_enrichment_celltype=CL:0002620!3.30e-40!23;CL:0000057!2.38e-29!75;CL:0000055!4.53e-16!180;CL:0002580!4.48e-15!3;CL:0000136!7.53e-15!15;CL:0002617!1.86e-10!2;CL:0000219!2.16e-09!390;CL:0000134!2.79e-09!358;CL:0002320!5.81e-09!365;CL:0000048!6.52e-08!430;CL:0000723!1.07e-07!436;CL:0000034!2.02e-07!444;CL:0002615!3.02e-07!3;CL:0000135!3.76e-07!3;CL:0000386!3.76e-07!3;CL:0000388!3.76e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.63e-69;23!CL:0000057;3.62e-11;73!CL:0002581;1.99e-09;1!CL:0002616;1.99e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.00e-69,23;CL:0000057,1.70e-25,76;CL:0000136,1.42e-13,15;CL:0002616,2.08e-09,1;CL:0002581,2.46e-09,1;CL:0000134,6.77e-07,354;CL:0000219,8.04e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.09e-25!5;DOID:450!2.09e-25!5;DOID:66!2.09e-25!5;DOID:423!2.09e-25!5;DOID:0080000!2.09e-25!5;DOID:11722!2.09e-25!5;DOID:1192!1.81e-07!3 | |ontology_enrichment_disease=DOID:17!2.09e-25!5;DOID:450!2.09e-25!5;DOID:66!2.09e-25!5;DOID:423!2.09e-25!5;DOID:0080000!2.09e-25!5;DOID:11722!2.09e-25!5;DOID:1192!1.81e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:17;4.00e-42;5!DOID:450;4.00e-42;5!DOID:66;4.00e-42;5!DOID:423;4.00e-42;5!DOID:0080000;4.00e-42;5!DOID:11722;4.00e-42;5!DOID:1192;9.69e-12;3!DOID:3369;1.99e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.84e-42,5;DOID:450,3.84e-42,5;DOID:66,3.84e-42,5;DOID:423,3.84e-42,5;DOID:0080000,3.84e-42,5;DOID:11722,3.84e-42,5;DOID:1192,8.22e-12,3;DOID:3369,1.62e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!9.20e-22!40;UBERON:0002199!5.43e-19!45;UBERON:0002416!5.43e-19!45;UBERON:0000310!8.70e-12!10;UBERON:0001443!1.08e-10!11;UBERON:0005406!1.14e-10!2;UBERON:0003102!7.61e-10!95;UBERON:0002384!2.39e-09!375;UBERON:0000043!3.76e-07!3 | |ontology_enrichment_uberon=UBERON:0002097!9.20e-22!40;UBERON:0002199!5.43e-19!45;UBERON:0002416!5.43e-19!45;UBERON:0000310!8.70e-12!10;UBERON:0001443!1.08e-10!11;UBERON:0005406!1.14e-10!2;UBERON:0003102!7.61e-10!95;UBERON:0002384!2.39e-09!375;UBERON:0000043!3.76e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.20e-28;41!UBERON:0002199;1.31e-22;46!UBERON:0002416;1.31e-22;46!UBERON:0005406;3.98e-17;2!UBERON:0003102;1.00e-16;50!UBERON:0001013;1.49e-09;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,7.79e-38,41;UBERON:0002199,1.82e-33,46;UBERON:0002416,1.82e-33,46;UBERON:0005406,5.10e-17,2;UBERON:0003102,3.01e-14,99;UBERON:0001013,1.60e-09,14;UBERON:0002384,2.60e-07,371 | |||
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|short_description=p@chr22:48819856..48819861,+ | |short_description=p@chr22:48819856..48819861,+ | ||
}} | }} |
Latest revision as of 22:14, 28 July 2015
Short description: | p@chr22:48819856..48819861, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:48819856..48819861, + |
Coexpression cluster: | C2330_Fibroblast_Adipocyte_Preadipocyte_mesenchymal_Myoblast_neurofibroma_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.00e-69 | 23 |
fibroblast | 1.70e-25 | 76 |
fat cell | 1.42e-13 | 15 |
perirenal adipocyte cell | 2.08e-09 | 1 |
perirenal preadipocyte | 2.46e-09 | 1 |
mesenchymal cell | 6.77e-07 | 354 |
motile cell | 8.04e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
skin of body | 7.79e-38 | 41 |
integument | 1.82e-33 | 46 |
integumental system | 1.82e-33 | 46 |
perirenal fat | 5.10e-17 | 2 |
surface structure | 3.01e-14 | 99 |
adipose tissue | 1.60e-09 | 14 |
connective tissue | 2.60e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.84e-42 | 5 |
myotonic disease | 3.84e-42 | 5 |
muscle tissue disease | 3.84e-42 | 5 |
myopathy | 3.84e-42 | 5 |
muscular disease | 3.84e-42 | 5 |
myotonic dystrophy | 3.84e-42 | 5 |
peripheral nervous system neoplasm | 8.22e-12 | 3 |
peripheral primitive neuroectodermal tumor | 1.62e-09 | 1 |