FFCP PHASE1:Hg19::chr22:46283597..46283636,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000451118_5end | |association_with_transcript=0bp_to_ENST00000451118_5end | ||
|cluster_id=chr22:46283597..46283636,- | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_1_at_ENST00000451118_5end | |description=CAGE_peak_1_at_ENST00000451118_5end | ||
|id=chr22:46283597..46283636,- | |id=chr22:46283597..46283636,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.93e-23;3!CL:0002327;8.00e-18;4!CL:0000083;1.03e-17;4!CL:0002202;1.08e-08;9!CL:0002632;1.08e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,3.27e-23,3;CL:0002327,7.35e-18,4;CL:0000083,1.03e-17,4;CL:0002202,1.12e-08,9;CL:0002632,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.71e-66;1 | |||
|ontology_enrichment_disease=DOID:1749!7.23e-15!14;DOID:305!2.05e-11!106;DOID:0050687!1.24e-07!143;DOID:5093!2.92e-07!4;DOID:1612!2.92e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3910;4.27e-34;2!DOID:4074;7.04e-34;2!DOID:4905;7.04e-34;2!DOID:3498;7.04e-34;2!DOID:5093;8.00e-18;4!DOID:1612;8.00e-18;4!DOID:1793;1.03e-17;4!DOID:3908;1.50e-14;5!DOID:170;2.74e-12;6!DOID:1325;8.57e-11;7!DOID:3904;8.57e-11;7!DOID:3905;1.08e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.04e-34,2;DOID:4074,7.05e-34,2;DOID:4905,7.05e-34,2;DOID:3498,7.05e-34,2;DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4;DOID:1793,1.03e-17,4;DOID:3908,1.60e-14,5;DOID:170,2.74e-12,6;DOID:1325,8.99e-11,7;DOID:3904,8.99e-11,7;DOID:3905,1.12e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0003127!5.53e-13!2;UBERON:0000974!9.92e-10!10;UBERON:0006562!5.51e-09!11;UBERON:0002294!2.36e-08!7;UBERON:0001173!2.36e-08!7;UBERON:0004912!2.36e-08!7;UBERON:0007029!9.71e-08!1;UBERON:0001000!1.18e-07!1;UBERON:0005352!1.18e-07!1;UBERON:0002372!1.72e-07!1;UBERON:0001961!1.72e-07!1;UBERON:0001744!1.72e-07!1;UBERON:0001735!1.72e-07!1;UBERON:0004913!3.01e-07!1;UBERON:0003703!3.01e-07!1;UBERON:0001174!3.01e-07!1;UBERON:0004914!3.01e-07!1;UBERON:0000997!4.09e-07!1;UBERON:0005056!4.09e-07!1;UBERON:0002394!5.07e-07!4;UBERON:0003928!5.07e-07!4;UBERON:0003343!8.44e-07!4;UBERON:0004785!8.44e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.27e-34;2!UBERON:0002173;4.27e-34;2!UBERON:0002186;4.27e-34;2!UBERON:0004821;2.93e-23;3!UBERON:0007499;2.93e-23;3!UBERON:0003215;2.93e-23;3!UBERON:0010368;2.93e-23;3!UBERON:0009911;2.93e-23;3!UBERON:0002299;2.93e-23;3!UBERON:0006524;2.93e-23;3!UBERON:0008874;2.93e-23;3!UBERON:0002169;2.93e-23;3!UBERON:0004894;2.93e-23;3!UBERON:0001911;8.00e-18;4!UBERON:0009856;8.00e-18;4!UBERON:0000310;5.93e-08;10!UBERON:0000058;5.93e-08;10!UBERON:0001264;6.56e-08;10!UBERON:0001443;2.40e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.04e-34,2;UBERON:0002173,5.04e-34,2;UBERON:0002186,5.04e-34,2;UBERON:0004821,3.27e-23,3;UBERON:0003215,3.27e-23,3;UBERON:0010368,3.27e-23,3;UBERON:0009911,3.27e-23,3;UBERON:0002299,3.27e-23,3;UBERON:0006524,3.27e-23,3;UBERON:0008874,3.27e-23,3;UBERON:0002169,3.27e-23,3;UBERON:0004894,3.27e-23,3;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000076,1.24e-09,8;UBERON:0005153,2.82e-08,37;UBERON:0000310,5.73e-08,10;UBERON:0001264,6.56e-08,10;UBERON:0001443,2.32e-07,11;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p1@ENST00000451118 | |short_description=p1@ENST00000451118 | ||
}} | }} |
Latest revision as of 22:06, 28 July 2015
Short description: | p1@ENST00000451118 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000451118_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000451118_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 3.27e-23 | 3 |
mammary gland epithelial cell | 7.35e-18 | 4 |
epithelial cell of pancreas | 1.03e-17 | 4 |
epithelial cell of tracheobronchial tree | 1.12e-08 | 9 |
epithelial cell of lower respiratory tract | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.04e-34 | 2 |
alveolar duct | 5.04e-34 | 2 |
bronchiole | 5.04e-34 | 2 |
pulmonary alveolus epithelium | 3.27e-23 | 3 |
alveolus | 3.27e-23 | 3 |
pulmonary lobule | 3.27e-23 | 3 |
lobule | 3.27e-23 | 3 |
alveolus of lung | 3.27e-23 | 3 |
alveolar system | 3.27e-23 | 3 |
pulmonary acinus | 3.27e-23 | 3 |
alveolar sac | 3.27e-23 | 3 |
alveolar wall | 3.27e-23 | 3 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
external ectoderm | 1.24e-09 | 8 |
epithelial bud | 2.82e-08 | 37 |
breast | 5.73e-08 | 10 |
pancreas | 6.56e-08 | 10 |
chest | 2.32e-07 | 11 |
epithelial fold | 9.72e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.04e-34 | 2 |
pancreas adenocarcinoma | 7.05e-34 | 2 |
pancreatic carcinoma | 7.05e-34 | 2 |
pancreatic ductal adenocarcinoma | 7.05e-34 | 2 |
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |
pancreatic cancer | 1.03e-17 | 4 |
non-small cell lung carcinoma | 1.60e-14 | 5 |
endocrine gland cancer | 2.74e-12 | 6 |
bronchus cancer | 8.99e-11 | 7 |
bronchogenic carcinoma | 8.99e-11 | 7 |
lung carcinoma | 1.12e-08 | 9 |