FFCP PHASE1:Hg19::chr22:45938067..45938094,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:45938067..45938094,+ to FFCP PHASE1:Hg19::chr22:45938067..45938094,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:45938067..45938094,+ | |||
|coexpression_cluster_id=C518 | |||
|description=CAGE_peak_at_chr22:45938067..45938094,+ | |||
|id=chr22:45938067..45938094,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.43e-12!180;CL:0000057!5.21e-09!75;CL:0000499!1.59e-08!27;CL:0000327!8.39e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000499;1.01e-11;28!CL:0002622;1.30e-07;3!CL:0000135;1.33e-07;3!CL:0000388;1.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000499,1.11e-11,28;CL:0002622,1.27e-07,3;CL:0000135,1.36e-07,3;CL:0000388,1.36e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!8.18e-08!22;UBERON:0000079!8.18e-08!22;UBERON:0004122!1.44e-07!15;UBERON:0000481!1.51e-07!347;UBERON:0001046!2.22e-07!19;UBERON:0004119!3.82e-07!169;UBERON:0000925!3.82e-07!169;UBERON:0006595!3.82e-07!169;UBERON:0004923!4.56e-07!57;UBERON:0000162!6.38e-07!14;UBERON:0001353!6.38e-07!14;UBERON:0000163!6.38e-07!14;UBERON:0006866!6.38e-07!14;UBERON:0000164!6.38e-07!14;UBERON:0000931!6.38e-07!14;UBERON:0001737!8.32e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003937;4.17e-10;12!UBERON:0005399;4.17e-10;12!UBERON:0003101;5.54e-09;22!UBERON:0000079;5.54e-09;22!UBERON:0002367;8.77e-09;11!UBERON:0010147;8.77e-09;11!UBERON:0004905;1.96e-08;8!UBERON:0000982;1.96e-08;8!UBERON:0004770;1.96e-08;8!UBERON:0007846;1.33e-07;3!UBERON:0000043;1.33e-07;3!UBERON:0007845;1.33e-07;3!UBERON:0000077;7.56e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004122,7.23e-12,15;UBERON:0000162,1.78e-10,14;UBERON:0001353,1.78e-10,14;UBERON:0000163,1.78e-10,14;UBERON:0006866,1.78e-10,14;UBERON:0000164,1.78e-10,14;UBERON:0000931,1.78e-10,14;UBERON:0003937,6.67e-10,12;UBERON:0005399,6.67e-10,12;UBERON:0003064,3.71e-09,28;UBERON:0001046,6.37e-09,19;UBERON:0003101,6.56e-09,22;UBERON:0000079,6.56e-09,22;UBERON:0002367,1.19e-08,11;UBERON:0010147,1.19e-08,11;UBERON:0009846,1.19e-08,11;UBERON:0003353,1.19e-08,11;UBERON:0004902,1.19e-08,11;UBERON:0003820,1.19e-08,11;UBERON:0009847,1.19e-08,11;UBERON:0004905,2.94e-08,8;UBERON:0000982,2.94e-08,8;UBERON:0004770,2.94e-08,8;UBERON:0000161,1.11e-07,36;UBERON:0007846,1.36e-07,3;UBERON:0000043,1.36e-07,3;UBERON:0007845,1.36e-07,3;UBERON:0001737,3.81e-07,9 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.704772020479856,3.00219895059391,0.893922188854576,9.59572376510406,0,5.05375898741465,6.7908263331958,0,0,0,0,1.23766352960047,0.994192127183747,0.672325146451775,0,0.730310090387373,0,0.123121058076788,1.42800483870977,0,0.572471974262113,0.410623275218653,0.753255837568817,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,1.44575660953827,0.50133791063589,2.75208386025565,0,1.45990461090791,0.378139268656271,1.10864698731282,0.351339142772504,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,6.59724227722272,0,1.12135520028461,0,0,0,0,0,1.21085942115945,0,0.468642863667593,2.80944069147288,0,2.83952493048422,0.469737994575059,0.647491777472526,0.561803226808994,1.42907919878425,0.859840221182376,2.37649296704261,2.37600571456411,1.7308685049499,0.910161361938026,0.718618141816238,0.505008341862199,0.875829639103749,0.554128230968366,0,1.22595118319608,0.45071417671979,0.113432183160021,0.179389635688862,1.70845911054854,0.423863802319124,0.300091096084402,0.92747276314595,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0.252433774244115,0.644349290496095,7.43571861366535,0.710019185033229,0,0.169560592310488,0,0,0,0.121973706129595,0.265059536642971,0.580969714347592,0.10366105501537,0.504641701751257,0.36497735907583,0,1.92972281457866,0,8.8229906326076,7.21879481669586,0.828147600278907,1.68584690078102,0.482022059766964,1.98529150918309,1.96091499683166,0.71181185733329,1.34831308160164,1.96221465125346,1.15424147083917,0,0,1.2347220339942,4.41026134156626,0,0,0,0,1.10689594688802,1.20097467208968,0,0,0,0.0925884451585296,0,0,0,0.927443239800615,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0,0,0,0,0,0.12624243342638,0.190493682876507,0,0,1.71072446022705,0.308482478109971,0.300343057843917,0,0.336393253036082,0.43596006883328,0.4400297149257,0,10.7296933755565,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.857867961948885,1.62786481617433,0,0.65147236858747,0.710783897485092,0,0,0,0,0,0.502257091432126,0,0.479249710983165,0,0,0.289562613335158,0.410952645100767,0,0,0,0,0,0,0,0,0.167516265334349,1.91381625495949,0,0,0,1.47229790062968,1.00034104211935,1.62759014219841,1.45579603071565,2.67643483195743,1.26161932027148,0.937131319941706,1.50473049863859,2.27407504055985,5.17365356462525,0,0.368738337083406,2.60650843404249,2.93701736194111,2.05886054286514,0,0,0,0,0,1.5119514666484,0,0,0.561320188866147,0.640695746278505,1.02341449813341,0.160853921143607,1.48418066444991,0,0,0.0821271560138091,0,0.232420756919918,2.29632954224082,0,0.552485933615378,3.67406234126742,4.91646153618136,16.2594274549686,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0,0.824328093181778,0,0,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0.137836572484531,0.537101224341368,0.435050081742686,0.170453254832202,0.356128142586949,0.330569830721956,0.192190067365106,0,0,0.464845549297286,1.25924938732256,0,0.616067160352178,0,0,0,0,1.48863347743867,0,0.190630193923825,1.27948895655667,3.85145089230528,0,0,0.179872457583315,1.09814811894422,1.17812402345686,0,0,0,0.48763373908959,0.243713489631284,1.05650146756755,1.22849920267187,3.53513579884282,0,0,0,0,1.73632660280006,4.59126326432643,0,0,0,0.286822704408103,0.491245205065606,0,0.354761064070598,6.33322905892992,9.22025700287725,0,1.39973888097993,0,0,0,1.50630081242847,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.735120647943095,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,1.39473591775749,0.276283915531148,0.251932747854276,0,0,0,0,0,0,1.28236427328014,0,0,0.969332746095218,0.0927680981618513,0,0,0.0874599999961957,1.44999915086959,0,0,0.945550727071745,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.139423744278603,2.46240827212151,0,0,1.07709173291727,0.217294743844016,0.31900115973192,1.28236630762607,2.13213910407454,0,0,0,0,0,0,0,0,0.632994193584081,0,0.424059214301822,0.216388639742091,0,0.353830258013357,0,0,0.247127877893006,0,0.067401132980677,1.60515529459758,0,0,0,0,0.789168805698781,0,0.61214552326098,1.5796644907122,0,0,0,0,0,0,0,0,0,0.293977192243133,0,1.39781334593624,0,0.0967563312890851,0,0.0821154570532092,1.35784623083787,0.0882561266915003,0.677942222341597,0,0,0,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0.429765441419957,0,1.95497680890578,0.687481272035051,0.717873024576814,0.599037001496973,0,0.446342914883745,0.0671834724867263,0,0,0,0.24724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| ||
|short_description=p@chr22:45938067..45938094,+ | |||
}} | }} |
Latest revision as of 22:04, 28 July 2015
Short description: | p@chr22:45938067..45938094, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:45938067..45938094, + |
Coexpression cluster: | C518_sacrococcigeal_Prostate_Mesenchymal_Fibroblast_tridermal_Hair_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stromal cell | 1.11e-11 | 28 |
prostate stromal cell | 1.27e-07 | 3 |
fibrocyte | 1.36e-07 | 3 |
tendon cell | 1.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genitourinary system | 7.23e-12 | 15 |
cloaca | 1.78e-10 | 14 |
anal region | 1.78e-10 | 14 |
embryonic cloaca | 1.78e-10 | 14 |
terminal part of digestive tract | 1.78e-10 | 14 |
primitive urogenital sinus | 1.78e-10 | 14 |
proctodeum | 1.78e-10 | 14 |
sex gland | 6.67e-10 | 12 |
male reproductive gland | 6.67e-10 | 12 |
intermediate mesoderm | 3.71e-09 | 28 |
hindgut | 6.37e-09 | 19 |
male organism | 6.56e-09 | 22 |
male reproductive system | 6.56e-09 | 22 |
prostate gland | 1.19e-08 | 11 |
male accessory sex gland | 1.19e-08 | 11 |
embryonic cloacal epithelium | 1.19e-08 | 11 |
epithelium of hindgut | 1.19e-08 | 11 |
urogenital sinus epithelium | 1.19e-08 | 11 |
prostate bud | 1.19e-08 | 11 |
prostate field | 1.19e-08 | 11 |
articulation | 2.94e-08 | 8 |
skeletal joint | 2.94e-08 | 8 |
articular system | 2.94e-08 | 8 |
orifice | 1.11e-07 | 36 |
dense regular connective tissue | 1.36e-07 | 3 |
tendon | 1.36e-07 | 3 |
regular connective tissue | 1.36e-07 | 3 |
larynx | 3.81e-07 | 9 |