FFCP PHASE1:Hg19::chr22:31501233..31501245,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:31501233..31501245,- | |||
|coexpression_cluster_id=C315 | |coexpression_cluster_id=C315 | ||
|description=CAGE_peak_at_chr22:31501233..31501245,- | |description=CAGE_peak_at_chr22:31501233..31501245,- | ||
|id=chr22:31501233..31501245,- | |id=chr22:31501233..31501245,- | ||
|ontology_enrichment_celltype=CL:0000136!3.92e-14!15;CL:0000055!2.18e-11!180;CL:0000680!2.99e-10!57;CL:0000056!2.99e-10!57;CL:0000355!2.99e-10!57;CL:0000183!8.13e-10!59;CL:0000187!1.05e-09!54;CL:0000393!2.24e-08!60;CL:0000211!2.24e-08!60;CL:0000192!2.38e-08!42;CL:0000514!2.38e-08!42;CL:0000048!5.93e-07!430 | |ontology_enrichment_celltype=CL:0000136!3.92e-14!15;CL:0000055!2.18e-11!180;CL:0000680!2.99e-10!57;CL:0000056!2.99e-10!57;CL:0000355!2.99e-10!57;CL:0000183!8.13e-10!59;CL:0000187!1.05e-09!54;CL:0000393!2.24e-08!60;CL:0000211!2.24e-08!60;CL:0000192!2.38e-08!42;CL:0000514!2.38e-08!42;CL:0000048!5.93e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000346;9.70e-14;3!CL:1000428;9.70e-14;3!CL:0000136;2.58e-12;13!CL:0002617;1.67e-10;2!CL:0002559;1.95e-08;5!CL:0000153;6.00e-08;9!CL:0000447;6.00e-08;9!CL:0002615;4.10e-07;3!CL:0000327;4.37e-07;15!CL:0002580;5.22e-07;3!CL:0002579;9.33e-07;3!CL:0000214;9.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,9.98e-14,3;CL:1000428,9.98e-14,3;CL:0000136,1.43e-10,15;CL:0002617,1.68e-10,2;CL:0002559,1.99e-08,5;CL:0000153,6.73e-08,9;CL:0000447,6.73e-08,9;CL:0002580,3.27e-07,3;CL:0002615,3.70e-07,3;CL:0000327,4.66e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.10e-07;3!DOID:127;4.10e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.89e-07,3;DOID:127,2.89e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.80e-12!83;UBERON:0002329!4.80e-12!83;UBERON:0003077!4.80e-12!83;UBERON:0003059!4.80e-12!83;UBERON:0007282!4.80e-12!83;UBERON:0009618!4.80e-12!83;UBERON:0007285!4.80e-12!83;UBERON:0002385!5.04e-11!63;UBERON:0001015!5.04e-11!63;UBERON:0000383!5.04e-11!63;UBERON:0004290!5.86e-11!70;UBERON:0001134!2.20e-10!61;UBERON:0002036!2.20e-10!61;UBERON:0003082!2.20e-10!61;UBERON:0000486!2.32e-10!82;UBERON:0005256!4.04e-09!143;UBERON:0002100!1.52e-07!216 | |ontology_enrichment_uberon=UBERON:0000914!4.80e-12!83;UBERON:0002329!4.80e-12!83;UBERON:0003077!4.80e-12!83;UBERON:0003059!4.80e-12!83;UBERON:0007282!4.80e-12!83;UBERON:0009618!4.80e-12!83;UBERON:0007285!4.80e-12!83;UBERON:0002385!5.04e-11!63;UBERON:0001015!5.04e-11!63;UBERON:0000383!5.04e-11!63;UBERON:0004290!5.86e-11!70;UBERON:0001134!2.20e-10!61;UBERON:0002036!2.20e-10!61;UBERON:0003082!2.20e-10!61;UBERON:0000486!2.32e-10!82;UBERON:0005256!4.04e-09!143;UBERON:0002100!1.52e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.57e-17;9!UBERON:0000042;2.57e-17;9!UBERON:0000412;9.70e-14;3!UBERON:0001992;9.70e-14;3!UBERON:0003688;3.18e-12;6!UBERON:0002358;3.18e-12;6!UBERON:0003684;3.18e-12;6!UBERON:0001178;3.18e-12;6!UBERON:0002073;1.95e-08;5!UBERON:0000310;1.36e-07;10!UBERON:0001443;6.63e-07;11!UBERON:0006915;9.33e-07;3!UBERON:0007616;9.33e-07;3!UBERON:0002217;9.33e-07;3!UBERON:0002018;9.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,9.98e-14,3;UBERON:0001992,9.98e-14,3;UBERON:0004457,1.19e-12,12;UBERON:0000042,1.19e-12,12;UBERON:0003688,3.76e-12,6;UBERON:0002358,3.76e-12,6;UBERON:0003684,3.76e-12,6;UBERON:0001178,3.76e-12,6;UBERON:0004923,1.35e-08,66;UBERON:0002073,1.99e-08,5;UBERON:0005086,1.99e-08,5;UBERON:0000310,1.04e-07,10;UBERON:0001443,5.21e-07,11 | |||
|phase1_expression=2.18014055124668,2.35510576280081,1.55049844505568,3.00219895059391,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0,2.09071047609954,0,0,0,0.253019692019503,0,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.289693037921647,1.5905718941022,1.45990461090791,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,1.52054421143703,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0,0.653847612453835,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0.309977343527296,0,2.22540236350701,0,0,0,0.250237039743928,0,0,1.22595118319608,1.50238058906597,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.403008392910561,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0.26593811658487,2.08014873822732,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.356857977594324,0,0,0,13.6444502433591,3.10419213877515,0,0,0.173767228936166,0,2.40200396667599,0,0,0,0.303127571446259,0,0,1.73675465473144,0,2.52594084989766,1.02511319404561,1.53512174720011,0.160853921143607,0,0,0.887808626565635,0.0821271560138091,0,0.116210378459959,0,0.601519410909855,0.276242966807689,0.114814448164607,0.182091168006717,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0,0.725083469571143,0.255679882248303,0,0,0.192190067365106,0,0,0.464845549297286,1.25924938732256,0,0,0.532306030317022,0,0,1.86062352764589,0,0.316379424718726,0.953150969619124,0,0,0,1.56989728039846,0.179872457583315,1.37268514868027,0.471249609382746,0,1.58510321173008,0.421258456238981,0.48763373908959,0.243713489631284,0,0,0.565621727814851,0,0,1.99031692572366,1.31535265576129,0,0.655894752046633,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0.354761064070598,1.05553817648832,1.31717957183961,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,3.42143546427988,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0,0.179515288819544,0,0.31900115973192,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,1.62899880526114,3.45688596480507,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0.306345576763462,0.655745261419609,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0,3.55924488638614,0.457680136793847,0.453692771289717,0.15543720058278,0.443565449968902,0,0,0.310525913752519,0,0,0,0,0.761610424337591,0,0.181848659202559,0.107410557042488,2.32016879939247,0.796191777397232,0.800055529326307,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0.327130788511688,0.655219697692825,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,2.1437183414724,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.7627641909343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|phase1_expression=2.18014055124668,2.35510576280081,1.55049844505568,3.00219895059391,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,0,0.730310090387373,0,0,0,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.651844533267181,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0.14828656316206,0,2.09071047609954,0,0,0,0.253019692019503,0,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0.289693037921647,1.5905718941022,1.45990461090791,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,1.52054421143703,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.379891534993739,0.132409180813219,0.573673241497627,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0,0.653847612453835,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0.309977343527296,0,2.22540236350701,0,0,0,0.250237039743928,0,0,1.22595118319608,1.50238058906597,0.113432183160021,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.403008392910561,0,0.193260853163297,0.272746120590835,0,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0.383382679165211,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0.26593811658487,2.08014873822732,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0.791951872933429,0.602878754119172,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0.356857977594324,0,0,0,13.6444502433591,3.10419213877515,0,0,0.173767228936166,0,2.40200396667599,0,0,0,0.303127571446259,0,0,1.73675465473144,0,2.52594084989766,1.02511319404561,1.53512174720011,0.160853921143607,0,0,0.887808626565635,0.0821271560138091,0,0.116210378459959,0,0.601519410909855,0.276242966807689,0.114814448164607,0.182091168006717,2.22911505431021,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0,0.725083469571143,0.255679882248303,0,0,0.192190067365106,0,0,0.464845549297286,1.25924938732256,0,0,0.532306030317022,0,0,1.86062352764589,0,0.316379424718726,0.953150969619124,0,0,0,1.56989728039846,0.179872457583315,1.37268514868027,0.471249609382746,0,1.58510321173008,0.421258456238981,0.48763373908959,0.243713489631284,0,0,0.565621727814851,0,0,1.99031692572366,1.31535265576129,0,0.655894752046633,0.405820753925408,0.6196469961995,0.281695602532241,0,0,0.35667105148125,0.354761064070598,1.05553817648832,1.31717957183961,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,3.42143546427988,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.307801034015188,0,0,0.179515288819544,0,0.31900115973192,1.4655614944298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0.714695326373367,0.662091970365432,0,1.62899880526114,3.45688596480507,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,1.08803560673895,0.5013797880454,0.306345576763462,0.655745261419609,0,0.886068179966986,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0,0,0,3.55924488638614,0.457680136793847,0.453692771289717,0.15543720058278,0.443565449968902,0,0,0.310525913752519,0,0,0,0,0.761610424337591,0,0.181848659202559,0.107410557042488,2.32016879939247,0.796191777397232,0.800055529326307,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0,0,0,0.327130788511688,0.655219697692825,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,2.1437183414724,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0.7627641909343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| ||
|short_description=p@chr22:31501233..31501245,- | |short_description=p@chr22:31501233..31501245,- | ||
}} | }} |
Latest revision as of 20:15, 28 July 2015
Short description: | p@chr22:31501233..31501245, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:31501233..31501245, - |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 9.98e-14 | 3 |
stem cell of epidermis | 9.98e-14 | 3 |
fat cell | 1.43e-10 | 15 |
adipocyte of breast | 1.68e-10 | 2 |
hair follicle cell | 1.99e-08 | 5 |
GAG secreting cell | 6.73e-08 | 9 |
carbohydrate secreting cell | 6.73e-08 | 9 |
preadipocyte of the breast | 3.27e-07 | 3 |
adipocyte of omentum tissue | 3.70e-07 | 3 |
extracellular matrix secreting cell | 4.66e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 9.98e-14 | 3 |
papillary layer of dermis | 9.98e-14 | 3 |
cavity lining | 1.19e-12 | 12 |
serous membrane | 1.19e-12 | 12 |
omentum | 3.76e-12 | 6 |
peritoneum | 3.76e-12 | 6 |
abdominal cavity | 3.76e-12 | 6 |
visceral peritoneum | 3.76e-12 | 6 |
organ component layer | 1.35e-08 | 66 |
hair follicle | 1.99e-08 | 5 |
hair follicle placode | 1.99e-08 | 5 |
breast | 1.04e-07 | 10 |
chest | 5.21e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.89e-07 | 3 |
leiomyoma | 2.89e-07 | 3 |