FFCP PHASE1:Hg19::chr22:19748074..19748094,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:19748074..19748094,- to FFCP PHASE1:Hg19::chr22:19748074..19748094,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:19748074..19748094,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr22:19748074..19748094,- | |||
|id=chr22:19748074..19748094,- | |||
|ontology_enrichment_celltype=CL:0002139!7.28e-12!24;CL:0005020!1.07e-09!6;CL:0002138!1.07e-09!6;CL:0005022!1.07e-09!6;CL:0002144!8.67e-09!3;CL:0000115!3.05e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.30e-40;3!CL:0002139;1.61e-19;24!CL:0000071;2.21e-18;18!CL:0000115;4.86e-09;36!CL:0002545;7.52e-08;2!CL:0002078;1.78e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.31e-40,3;CL:0002139,1.67e-19,24;CL:0000071,2.06e-18,18;CL:0002546,2.06e-18,18;CL:0000115,6.36e-13,36;CL:0002078,2.80e-10,45;CL:0002545,6.58e-08,2;CL:0000213,6.68e-08,58;CL:0000215,6.68e-08,58;CL:0000076,2.56e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.21e-18;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;9.36e-15;1!DOID:3350;5.01e-08;2!DOID:3193;7.52e-08;2!DOID:962;7.52e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.07e-14,1;DOID:3350,5.37e-08,2;DOID:3193,8.60e-08,2;DOID:962,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001915!8.67e-09!3;UBERON:0001982!8.67e-09!3;UBERON:0000013!6.73e-08!5;UBERON:0002410!6.73e-08!5;UBERON:0001473!3.69e-07!8;UBERON:0004536!3.69e-07!8;UBERON:0006558!3.69e-07!8;UBERON:0000065!4.23e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;1.30e-40;3!UBERON:0001915;1.30e-40;3!UBERON:0001982;1.30e-40;3!UBERON:0004638;2.21e-18;18!UBERON:0001986;2.21e-18;18!UBERON:0004852;2.21e-18;18!UBERON:0000487;4.79e-15;22!UBERON:0006914;3.05e-13;25!UBERON:0000490;6.45e-10;33!UBERON:0003714;7.52e-08;2!UBERON:0005800;7.52e-08;2!UBERON:0001515;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,1.31e-40,3;UBERON:0001915,1.31e-40,3;UBERON:0001982,1.31e-40,3;UBERON:0004638,2.06e-18,18;UBERON:0001986,2.06e-18,18;UBERON:0004852,2.06e-18,18;UBERON:0000487,4.51e-15,22;UBERON:0006914,2.90e-13,25;UBERON:0005800,6.58e-08,2;UBERON:0001515,6.58e-08,2;UBERON:0003714,8.60e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,1.06729878806013,0.33472061276467,2.01414658554573,2.28081631715554,2.92874469057803,0,1.62028389576352,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.482022059766964,0.330881918197182,0,0,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.495854746082934,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26672954583968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,24.9127981591032,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,2.23581842213102,0,0,0,0,0.882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.627617077873999,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0.139879507719444,0,0.255788742607303,0.539124056983409,0.314531883711793,0,0,5.95209776284712,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,2.58591088751157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0.158013611732727,0,1.56472445072321,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,1.06729878806013,0.33472061276467,2.01414658554573,2.28081631715554,2.92874469057803,0,1.62028389576352,0.0892997282840798,0,0,1.53316637465883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.482022059766964,0.330881918197182,0,0,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0.574265537996172,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.495854746082934,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26672954583968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,1.92495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,24.9127981591032,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.278847488557207,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,2.23581842213102,0,0,0,0,0.882561266915003,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0.135904206073614,0.627617077873999,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0.276697269872462,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0.139879507719444,0,0.255788742607303,0.539124056983409,0.314531883711793,0,0,5.95209776284712,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,2.58591088751157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0.158013611732727,0,1.56472445072321,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473314686579554,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,0,0,0.665320713092027,0,0,0,0,0,0.366724332548599,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p@chr22:19748074..19748094,- | |||
}} | }} |
Latest revision as of 19:08, 28 July 2015
Short description: | p@chr22:19748074..19748094, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:19748074..19748094, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.31e-40 | 3 |
endothelial cell of vascular tree | 1.67e-19 | 24 |
blood vessel endothelial cell | 2.06e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.06e-18 | 18 |
endothelial cell | 6.36e-13 | 36 |
meso-epithelial cell | 2.80e-10 | 45 |
thoracic aorta endothelial cell | 6.58e-08 | 2 |
lining cell | 6.68e-08 | 58 |
barrier cell | 6.68e-08 | 58 |
squamous epithelial cell | 2.56e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 1.31e-40 | 3 |
endothelium of capillary | 1.31e-40 | 3 |
capillary | 1.31e-40 | 3 |
blood vessel endothelium | 2.06e-18 | 18 |
endothelium | 2.06e-18 | 18 |
cardiovascular system endothelium | 2.06e-18 | 18 |
simple squamous epithelium | 4.51e-15 | 22 |
squamous epithelium | 2.90e-13 | 25 |
segment of aorta | 6.58e-08 | 2 |
thoracic aorta | 6.58e-08 | 2 |
neural tissue | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.07e-14 | 1 |
mesenchymal cell neoplasm | 5.37e-08 | 2 |
peripheral nerve sheath neoplasm | 8.60e-08 | 2 |
neurofibroma | 8.60e-08 | 2 |