FFCP PHASE1:Hg19::chr21:47552457..47552476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:47552457..47552476,+ | |||
|description=CAGE_peak_at_chr21:47552457..47552476,+ | |description=CAGE_peak_at_chr21:47552457..47552476,+ | ||
|id=chr21:47552457..47552476,+ | |id=chr21:47552457..47552476,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.47e-24!180;CL:0000057!2.39e-14!75;CL:0000680!1.99e-12!57;CL:0000056!1.99e-12!57;CL:0000355!1.99e-12!57;CL:0000183!3.85e-12!59;CL:0000187!5.62e-12!54;CL:0000393!2.60e-11!60;CL:0000211!2.60e-11!60;CL:0000048!3.73e-10!430;CL:0000723!1.62e-09!436;CL:0000034!1.04e-08!444;CL:0002570!9.25e-08!8 | |ontology_enrichment_celltype=CL:0000055!3.47e-24!180;CL:0000057!2.39e-14!75;CL:0000680!1.99e-12!57;CL:0000056!1.99e-12!57;CL:0000355!1.99e-12!57;CL:0000183!3.85e-12!59;CL:0000187!5.62e-12!54;CL:0000393!2.60e-11!60;CL:0000211!2.60e-11!60;CL:0000048!3.73e-10!430;CL:0000723!1.62e-09!436;CL:0000034!1.04e-08!444;CL:0002570!9.25e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0002521;1.70e-13;3!CL:0000499;2.03e-10;28!CL:1000306;8.32e-10;4!CL:0002547;8.32e-10;4!CL:0002575;7.92e-09;2!CL:1000487;7.92e-09;2!CL:0002602;7.92e-09;2!CL:0002595;4.55e-08;5!CL:0000153;9.05e-08;9!CL:0000447;9.05e-08;9!CL:0000214;8.00e-07;3!CL:0000327;8.84e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,1.01e-13,3;CL:0000499,2.27e-10,28;CL:1000306,1.69e-09,4;CL:0002547,1.69e-09,4;CL:1000487,4.15e-09,2;CL:0002575,5.10e-09,2;CL:0002602,7.33e-09,2;CL:0000048,1.40e-08,427;CL:0000723,2.47e-08,433;CL:0000187,3.29e-08,55;CL:0000034,5.16e-08,441;CL:0002595,5.40e-08,5;CL:0000153,1.03e-07,9;CL:0000447,1.03e-07,9;CL:0000680,1.16e-07,58;CL:0000056,1.16e-07,58;CL:0000355,1.16e-07,58;CL:0000393,3.63e-07,61;CL:0000211,3.63e-07,61;CL:0000214,7.81e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.48e-16!83;UBERON:0002329!1.48e-16!83;UBERON:0003077!1.48e-16!83;UBERON:0003059!1.48e-16!83;UBERON:0007282!1.48e-16!83;UBERON:0009618!1.48e-16!83;UBERON:0007285!1.48e-16!83;UBERON:0004290!3.44e-13!70;UBERON:0002385!1.75e-12!63;UBERON:0001015!1.75e-12!63;UBERON:0000383!1.75e-12!63;UBERON:0001134!1.57e-11!61;UBERON:0002036!1.57e-11!61;UBERON:0003082!1.57e-11!61;UBERON:0000486!3.47e-11!82;UBERON:0005256!1.84e-10!143;UBERON:0001013!4.48e-09!14;UBERON:0002100!1.72e-07!216;UBERON:0003102!2.61e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;6.37e-14;5!UBERON:0002190;1.70e-13;3!UBERON:0004905;1.04e-12;8!UBERON:0000982;1.04e-12;8!UBERON:0004770;1.04e-12;8!UBERON:0004797;8.32e-10;4!UBERON:0000415;8.32e-10;4!UBERON:0007240;8.32e-10;4!UBERON:0005742;8.32e-10;4!UBERON:0005734;8.32e-10;4!UBERON:0004664;8.32e-10;4!UBERON:0004663;8.32e-10;4!UBERON:0006444;7.92e-09;2!UBERON:0001995;7.92e-09;2!UBERON:0004715;7.92e-09;2!UBERON:0004573;1.77e-08;33!UBERON:0004571;1.77e-08;33!UBERON:0003937;4.13e-08;12!UBERON:0005399;4.13e-08;12!UBERON:0003834;4.55e-08;5!UBERON:0001533;4.55e-08;5!UBERON:0011135;1.28e-07;5!UBERON:0002216;1.28e-07;5!UBERON:0011134;1.28e-07;5!UBERON:0002209;1.28e-07;5!UBERON:0002213;1.28e-07;5!UBERON:0007844;1.28e-07;5!UBERON:0011138;1.28e-07;5!UBERON:0001130;1.28e-07;5!UBERON:0001066;1.28e-07;5!UBERON:0001468;1.28e-07;5!UBERON:0006915;8.00e-07;3!UBERON:0007616;8.00e-07;3!UBERON:0002217;8.00e-07;3!UBERON:0002018;8.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,3.77e-14,5;UBERON:0002190,1.01e-13,3;UBERON:0004905,1.39e-12,8;UBERON:0000982,1.39e-12,8;UBERON:0004770,1.39e-12,8;UBERON:0000486,1.76e-10,83;UBERON:0002329,1.14e-09,71;UBERON:0003059,1.14e-09,71;UBERON:0007282,1.14e-09,71;UBERON:0004290,1.14e-09,71;UBERON:0009618,1.14e-09,71;UBERON:0000415,1.69e-09,4;UBERON:0007240,1.69e-09,4;UBERON:0005742,1.69e-09,4;UBERON:0005734,1.69e-09,4;UBERON:0004664,1.69e-09,4;UBERON:0004663,1.69e-09,4;UBERON:0003077,1.73e-09,72;UBERON:0007285,1.73e-09,72;UBERON:0007524,2.58e-09,73;UBERON:0006444,7.33e-09,2;UBERON:0001995,7.33e-09,2;UBERON:0004715,7.33e-09,2;UBERON:0007503,1.65e-08,78;UBERON:0004573,2.67e-08,33;UBERON:0004571,2.67e-08,33;UBERON:0003937,3.14e-08,12;UBERON:0005399,3.14e-08,12;UBERON:0003834,5.40e-08,5;UBERON:0001533,5.40e-08,5;UBERON:0003104,6.55e-08,160;UBERON:0009142,6.55e-08,160;UBERON:0005256,1.23e-07,122;UBERON:0011135,1.71e-07,5;UBERON:0002216,1.71e-07,5;UBERON:0011134,1.71e-07,5;UBERON:0002209,1.71e-07,5;UBERON:0002213,1.71e-07,5;UBERON:0005856,1.71e-07,5;UBERON:0005866,1.71e-07,5;UBERON:0005863,1.71e-07,5;UBERON:0007844,1.71e-07,5;UBERON:0011138,1.71e-07,5;UBERON:0001130,1.71e-07,5;UBERON:0001066,1.71e-07,5;UBERON:0001468,1.71e-07,5;UBERON:0001134,5.17e-07,62;UBERON:0002036,5.17e-07,62;UBERON:0003082,5.17e-07,62;UBERON:0006915,7.81e-07,3;UBERON:0007616,7.81e-07,3;UBERON:0002217,7.81e-07,3;UBERON:0002018,7.81e-07,3 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.893922188854576,0,12.6649939084155,1.89515962028049,5.22371256399677,0,0,0,0,1.11389717664042,1.65698687863958,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0.670700859703636,0.255725123687061,1.0843174571537,0.50133791063589,4.05570253090306,0.795285947051099,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,1.01304409331664,0,6.02356903572509,1.06400514659507,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,7.80400192075801,0.570471821544449,3.73621701379503,0,0.323745888736263,0,0,0.122834317311768,0.723280468230358,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0.438977620880838,0.612975591598039,0.45071417671979,0.113432183160021,0.538168907066586,0.427114777637135,0.423863802319124,0.300091096084402,0.309157587715317,0,0.18611685633159,0,0.487185025805993,0,0.736399189138395,2.7479829659198,0,0.201504196455281,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.411309970813294,0,0,0.112131084345361,0,0.1466765716419,0.258543431515556,10.7296933755565,0.845302752556,0.531876233169741,0,0,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,1.42636905040718,0.289562613335158,0.205476322550383,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0.542530047399471,0.415941723061614,0.356857977594324,0.157702415033935,0.117141414992713,0.300946099727719,2.27407504055985,1.03473071292505,0,0,3.5622281931914,1.37060810223918,1.71571711905428,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.804269605718038,0,0.154209693802656,2.84098760501003,0.657017248110473,1.55776328755086,1.74315567689939,0,0,0,0.574072240823034,1.63882051206045,2.09799063935079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,13.1472176877286,0,0.307007349452259,0.137836572484531,0.429680979473094,0.290033387828457,0.340906509664404,1.95870478422822,0,0,0,0,0.464845549297286,2.20368642781448,0,0.308033580176089,0,0,1.29726953372744,0,0,0.316379424718726,0,0,0,1.27281299170375,0.78494864019923,0.179872457583315,0,0.117812402345686,0,0,0,0,1.21856744815642,0,1.63799893689583,1.69686518344455,0,0,3.3171948762061,2.19225442626881,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.196498082026242,0.35667105148125,0,6.33322905892992,4.61012850143863,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0,0,0,0.643012593860077,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0.105600336519406,0,0,0.714695326373367,0,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.701139929541673,0.554805861502613,0.189403005275089,0.50313580350515,2.66943366478961,0.228840068396924,0.604923695052956,0.15543720058278,0,0.159296767163702,0.899606224327209,0.310525913752519,0.414706207840855,1.06336685823198,0,0.300515217994437,0,0.406870733204662,0.363697318405119,0,0,0.796191777397232,0,0.686791410365586,0.336749488765919,0,0.192619830407303,0,0,0.453411851024545,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3807198521202,0.596748666348824,0.225630985047772,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0.47775168788705,0,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0.490296643507811,0,0,0,0,0.1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| ||
|short_description=p@chr21:47552457..47552476,+ | |short_description=p@chr21:47552457..47552476,+ | ||
}} | }} |
Latest revision as of 18:49, 28 July 2015
Short description: | p@chr21:47552457..47552476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:47552457..47552476, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 1.01e-13 | 3 |
stromal cell | 2.27e-10 | 28 |
fibroblast of tunica adventitia of artery | 1.69e-09 | 4 |
fibroblast of the aortic adventitia | 1.69e-09 | 4 |
smooth muscle cell of prostate | 4.15e-09 | 2 |
central nervous system pericyte | 5.10e-09 | 2 |
annulus pulposus cell | 7.33e-09 | 2 |
multi fate stem cell | 1.40e-08 | 427 |
somatic stem cell | 2.47e-08 | 433 |
muscle cell | 3.29e-08 | 55 |
stem cell | 5.16e-08 | 441 |
smooth muscle cell of the subclavian artery | 5.40e-08 | 5 |
GAG secreting cell | 1.03e-07 | 9 |
carbohydrate secreting cell | 1.03e-07 | 9 |
muscle precursor cell | 1.16e-07 | 58 |
myoblast | 1.16e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.16e-07 | 58 |
electrically responsive cell | 3.63e-07 | 61 |
electrically active cell | 3.63e-07 | 61 |
synovial cell | 7.81e-07 | 3 |