FFCP PHASE1:Hg19::chr21:44592820..44592840,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-431bp_to_CU686889_5end | |association_with_transcript=-431bp_to_CU686889_5end | ||
|cluster_id=chr21:44592820..44592840,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_CU686889_5end | |description=CAGE_peak_2_at_CU686889_5end | ||
|id=chr21:44592820..44592840,- | |id=chr21:44592820..44592840,- | ||
|ontology_enrichment_celltype=CL:0000306!1.41e-14!4;CL:0002222!1.41e-14!4;CL:0002224!1.41e-14!4;CL:0002322!1.95e-11!5;CL:0000181!1.98e-10!12;CL:0000417!1.98e-10!12;CL:0000668!1.98e-10!12;CL:0000414!1.98e-10!12;CL:0000412!1.98e-10!12;CL:0000182!1.98e-10!12;CL:0000075!3.58e-08!27 | |ontology_enrichment_celltype=CL:0000306!1.41e-14!4;CL:0002222!1.41e-14!4;CL:0002224!1.41e-14!4;CL:0002322!1.95e-11!5;CL:0000181!1.98e-10!12;CL:0000417!1.98e-10!12;CL:0000668!1.98e-10!12;CL:0000414!1.98e-10!12;CL:0000412!1.98e-10!12;CL:0000182!1.98e-10!12;CL:0000075!3.58e-08!27 | ||
|ontology_enrichment_celltype_v019=CL:0000306;5.82e-50;4!CL:0002222;5.82e-50;4!CL:0002224;5.82e-50;4!CL:0000075;2.18e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,5.14e-50,4;CL:0002222,5.14e-50,4;CL:0002224,5.14e-50,4;CL:0000075,2.14e-08,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010077!1.41e-14!4;UBERON:0005389!1.41e-14!4;UBERON:0000484!1.41e-14!4;UBERON:0002546!1.41e-14!4;UBERON:0000965!1.41e-14!4;UBERON:0001803!1.41e-14!4;UBERON:0003073!1.41e-14!4;UBERON:0005426!1.41e-14!4;UBERON:0002107!2.44e-11!19;UBERON:0006925!2.44e-11!19;UBERON:0008836!2.44e-11!19;UBERON:0000970!4.93e-11!20;UBERON:0002104!1.61e-10!21;UBERON:0008835!7.92e-10!22;UBERON:0003894!7.92e-10!22;UBERON:0000020!1.26e-09!23;UBERON:0009854!2.07e-09!23;UBERON:0001032!3.11e-09!24;UBERON:0004456!3.11e-09!24;UBERON:0007499!1.12e-08!25;UBERON:0009497!1.12e-08!25;UBERON:0000015!1.12e-08!25;UBERON:0002423!1.12e-08!25;UBERON:0006235!1.12e-08!25;UBERON:0004161!1.12e-08!25;UBERON:0005057!2.37e-08!26;UBERON:0009856!2.37e-08!26;UBERON:0000076!9.71e-08!8;UBERON:0002365!4.90e-07!31;UBERON:0002330!4.90e-07!31;UBERON:0000019!6.63e-07!19;UBERON:0000047!6.63e-07!19;UBERON:0004088!6.63e-07!19;UBERON:0003072!6.63e-07!19;UBERON:0003071!6.63e-07!19;UBERON:0004128!6.63e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;5.82e-50;4!UBERON:0005389;5.82e-50;4!UBERON:0000484;5.82e-50;4!UBERON:0000965;5.82e-50;4!UBERON:0001803;5.82e-50;4!UBERON:0000970;4.10e-23;20!UBERON:0002104;4.59e-22;21!UBERON:0000020;3.07e-20;23!UBERON:0001032;1.94e-19;24!UBERON:0004456;1.94e-19;24!UBERON:0007625;5.38e-19;11!UBERON:0001801;3.53e-15;14!UBERON:0000019;1.77e-11;19!UBERON:0000047;1.77e-11;19!UBERON:0004088;1.77e-11;19!UBERON:0010230;1.77e-11;19!UBERON:0001456;1.73e-10;21!UBERON:0010371;3.63e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,5.14e-50,4;UBERON:0005389,5.14e-50,4;UBERON:0000484,5.14e-50,4;UBERON:0002546,5.14e-50,4;UBERON:0000965,5.14e-50,4;UBERON:0001803,5.14e-50,4;UBERON:0003073,5.14e-50,4;UBERON:0005426,5.14e-50,4;UBERON:0000076,1.11e-25,8;UBERON:0000970,4.43e-22,21;UBERON:0002104,4.43e-22,21;UBERON:0000020,1.88e-19,24;UBERON:0001032,1.88e-19,24;UBERON:0004456,1.88e-19,24;UBERON:0007625,5.14e-19,11;UBERON:0001801,3.41e-15,14;UBERON:0000019,5.70e-11,20;UBERON:0000047,5.70e-11,20;UBERON:0010312,5.70e-11,20;UBERON:0004088,5.70e-11,20;UBERON:0010230,5.70e-11,20;UBERON:0003072,5.70e-11,20;UBERON:0004128,5.70e-11,20;UBERON:0003071,5.70e-11,20;UBERON:0001456,4.53e-10,22;UBERON:0005085,1.92e-07,31 | |||
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|short_description=p2@CU686889 | |short_description=p2@CU686889 | ||
}} | }} |
Latest revision as of 18:16, 28 July 2015
Short description: | p2@CU686889 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CU686889_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -431bp_to_CU686889_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 5.14e-50 | 4 |
vertebrate lens cell | 5.14e-50 | 4 |
lens epithelial cell | 5.14e-50 | 4 |
columnar/cuboidal epithelial cell | 2.14e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 5.14e-50 | 4 |
transparent eye structure | 5.14e-50 | 4 |
simple cuboidal epithelium | 5.14e-50 | 4 |
cranial placode | 5.14e-50 | 4 |
lens of camera-type eye | 5.14e-50 | 4 |
epithelium of lens | 5.14e-50 | 4 |
lens placode | 5.14e-50 | 4 |
lens vesicle | 5.14e-50 | 4 |
external ectoderm | 1.11e-25 | 8 |
eye | 4.43e-22 | 21 |
visual system | 4.43e-22 | 21 |
sense organ | 1.88e-19 | 24 |
sensory system | 1.88e-19 | 24 |
entire sense organ system | 1.88e-19 | 24 |
pigment epithelium of eye | 5.14e-19 | 11 |
anterior segment of eyeball | 3.41e-15 | 14 |
camera-type eye | 5.70e-11 | 20 |
simple eye | 5.70e-11 | 20 |
immature eye | 5.70e-11 | 20 |
ocular region | 5.70e-11 | 20 |
eyeball of camera-type eye | 5.70e-11 | 20 |
optic cup | 5.70e-11 | 20 |
optic vesicle | 5.70e-11 | 20 |
eye primordium | 5.70e-11 | 20 |
face | 4.53e-10 | 22 |
ectodermal placode | 1.92e-07 | 31 |