FFCP PHASE1:Hg19::chr21:38121766..38121769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:38121766..38121769,+ | |||
|coexpression_cluster_id=C2512 | |||
|description=CAGE_peak_at_chr21:38121766..38121769,+ | |description=CAGE_peak_at_chr21:38121766..38121769,+ | ||
|id=chr21:38121766..38121769,+ | |id=chr21:38121766..38121769,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.09e-08!254 | |ontology_enrichment_celltype=CL:0000066!3.09e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002539;7.13e-11;10!CL:0002379;1.97e-07;1!CL:0000359;6.46e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,7.05e-11,10;CL:0002379,1.80e-07,1;CL:0000359,7.17e-07,32 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.97e-07;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.59e-20!143;DOID:305!4.64e-17!106;DOID:162!6.29e-15!235;DOID:14566!4.13e-14!239;DOID:1749!2.99e-07!14 | |ontology_enrichment_disease=DOID:0050687!4.59e-20!143;DOID:305!4.64e-17!106;DOID:162!6.29e-15!235;DOID:14566!4.13e-14!239;DOID:1749!2.99e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3371;6.16e-08;1!DOID:4549;6.16e-08;1!DOID:5861;6.16e-08;1!DOID:6496;6.16e-08;1!DOID:3571;7.02e-08;1!DOID:3620;1.97e-07;1!DOID:3565;1.97e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.37e-08,1;DOID:4549,6.37e-08,1;DOID:5861,6.37e-08,1;DOID:6496,6.37e-08,1;DOID:3571,7.26e-08,1;DOID:3620,1.80e-07,1;DOID:3565,1.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.05e-12!238;UBERON:0009142!1.05e-12!238;UBERON:0005177!1.09e-09!107;UBERON:0000481!2.37e-08!347;UBERON:0002100!2.62e-08!216;UBERON:0002113!2.64e-07!27;UBERON:0003918!2.64e-07!27;UBERON:0005095!2.64e-07!27;UBERON:0007687!2.64e-07!27;UBERON:0004905!5.12e-07!5;UBERON:0000982!5.12e-07!5;UBERON:0004770!5.12e-07!5 | |ontology_enrichment_uberon=UBERON:0003104!1.05e-12!238;UBERON:0009142!1.05e-12!238;UBERON:0005177!1.09e-09!107;UBERON:0000481!2.37e-08!347;UBERON:0002100!2.62e-08!216;UBERON:0002113!2.64e-07!27;UBERON:0003918!2.64e-07!27;UBERON:0005095!2.64e-07!27;UBERON:0007687!2.64e-07!27;UBERON:0004905!5.12e-07!5;UBERON:0000982!5.12e-07!5;UBERON:0004770!5.12e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004237;7.13e-11;10!UBERON:0004695;7.13e-11;10!UBERON:0002111;7.13e-11;10!UBERON:0004178;7.13e-11;10!UBERON:0004573;1.26e-08;33!UBERON:0004571;1.26e-08;33!UBERON:0000947;1.12e-07;21!UBERON:0010191;1.12e-07;21!UBERON:0000941;1.97e-07;1!UBERON:0001785;1.97e-07;1!UBERON:0002464;1.97e-07;1!UBERON:0004904;1.97e-07;1!UBERON:0001021;1.97e-07;1!UBERON:0001135;2.87e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,7.05e-11,10;UBERON:0004695,7.05e-11,10;UBERON:0002111,7.05e-11,10;UBERON:0004178,7.05e-11,10;UBERON:0004573,6.97e-09,33;UBERON:0004571,6.97e-09,33;UBERON:0000947,1.11e-07,21;UBERON:0010191,1.11e-07,21;UBERON:0000941,1.58e-07,1;UBERON:0001785,1.58e-07,1;UBERON:0002464,1.58e-07,1;UBERON:0004904,1.58e-07,1;UBERON:0001021,1.58e-07,1;UBERON:0003902,1.58e-07,1;UBERON:0005425,1.58e-07,1;UBERON:0001135,2.85e-07,15;UBERON:0001637,8.69e-07,42;UBERON:0003509,8.69e-07,42;UBERON:0004572,8.69e-07,42;UBERON:0003914,9.42e-07,117 | |||
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| ||
|short_description=p@chr21:38121766..38121769,+ | |short_description=p@chr21:38121766..38121769,+ | ||
}} | }} |
Latest revision as of 17:42, 28 July 2015
Short description: | p@chr21:38121766..38121769, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:38121766..38121769, + |
Coexpression cluster: | C2512_Aortic_CD14_Fibroblast_Smooth_extraskeletal_tridermal_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 7.05e-11 | 10 |
meningothelial cell | 1.80e-07 | 1 |
vascular associated smooth muscle cell | 7.17e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 7.05e-11 | 10 |
arterial system smooth muscle | 7.05e-11 | 10 |
artery smooth muscle tissue | 7.05e-11 | 10 |
aorta smooth muscle tissue | 7.05e-11 | 10 |
systemic artery | 6.97e-09 | 33 |
systemic arterial system | 6.97e-09 | 33 |
aorta | 1.11e-07 | 21 |
aortic system | 1.11e-07 | 21 |
cranial nerve II | 1.58e-07 | 1 |
cranial nerve | 1.58e-07 | 1 |
nerve trunk | 1.58e-07 | 1 |
nerve connecting eye with brain | 1.58e-07 | 1 |
nerve | 1.58e-07 | 1 |
retinal neural layer | 1.58e-07 | 1 |
presumptive neural retina | 1.58e-07 | 1 |
smooth muscle tissue | 2.85e-07 | 15 |
artery | 8.69e-07 | 42 |
arterial blood vessel | 8.69e-07 | 42 |
arterial system | 8.69e-07 | 42 |
epithelial tube | 9.42e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.37e-08 | 1 |
extraosseous chondrosarcoma | 6.37e-08 | 1 |
myxoid chondrosarcoma | 6.37e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 6.37e-08 | 1 |
liver cancer | 7.26e-08 | 1 |
central nervous system cancer | 1.80e-07 | 1 |
meningioma | 1.80e-07 | 1 |