FFCP PHASE1:Hg19::chr21:34931287..34931294,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:34931287..34931294,+ to FFCP PHASE1:Hg19::chr21:34931287..34931294,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:34931287..34931294,+ | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr21:34931287..34931294,+ | |||
|id=chr21:34931287..34931294,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.16e-31!172;CL:0000566!2.16e-31!172;CL:0000988!4.44e-29!182;CL:0002032!1.52e-28!165;CL:0000837!1.52e-28!165;CL:0000738!1.26e-27!140;CL:0002031!1.35e-24!124;CL:0002087!1.43e-24!119;CL:0002057!1.16e-18!42;CL:0000763!1.05e-17!112;CL:0000049!1.05e-17!112;CL:0000860!1.28e-16!45;CL:0000766!8.62e-15!76;CL:0000839!3.67e-14!70;CL:0002009!9.05e-14!65;CL:0000557!1.66e-13!71;CL:0002194!5.04e-13!63;CL:0000576!5.04e-13!63;CL:0000040!5.04e-13!63;CL:0000559!5.04e-13!63;CL:0000542!2.89e-10!53;CL:0000051!2.89e-10!53;CL:0000838!7.25e-10!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-14;33!CL:0002057;1.58e-14;33!CL:0000576;1.30e-12;48!CL:0000473;5.05e-10;39!CL:0000234;5.05e-10;39!CL:0002087;4.28e-09;104!CL:0000766;9.51e-09;69!CL:0000763;1.06e-07;100!CL:0000738;2.27e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.84e-34,168;CL:0000988,1.34e-32,177;CL:0002032,2.74e-31,161;CL:0000837,2.74e-31,161;CL:0000738,5.92e-30,136;CL:0002087,6.55e-27,115;CL:0002031,6.56e-27,120;CL:0000860,1.19e-20,42;CL:0002057,1.19e-20,42;CL:0000763,2.59e-20,108;CL:0000049,2.59e-20,108;CL:0000766,1.64e-17,72;CL:0000473,3.81e-17,48;CL:0000234,3.81e-17,48;CL:0000839,1.64e-16,66;CL:0002009,3.94e-16,61;CL:0000557,5.22e-16,67;CL:0002194,2.84e-15,59;CL:0000576,2.84e-15,59;CL:0000040,2.84e-15,59;CL:0000559,2.84e-15,59;CL:0000542,3.14e-10,53;CL:0000051,3.14e-10,53;CL:0000838,8.46e-10,52 | |||
|ontology_enrichment_development_v019=CL:0002057;8.04e-15;42!CL:0000049;6.06e-07;108 | |||
|ontology_enrichment_disease=DOID:162!1.39e-11!235;DOID:14566!6.47e-11!239;DOID:0050686!3.01e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.42e-09,235;DOID:14566,6.19e-09,239;DOID:0050686,1.29e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.17e-13!102;UBERON:0003061!1.17e-13!102;UBERON:0001474!1.36e-11!86;UBERON:0002193!2.25e-11!112;UBERON:0002371!3.16e-11!80;UBERON:0004765!1.32e-07!101;UBERON:0001434!1.32e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.59e-16,98;UBERON:0003061,2.59e-16,98;UBERON:0002193,1.31e-13,108;UBERON:0001474,1.35e-13,82;UBERON:0002371,3.21e-13,76;UBERON:0004765,9.28e-11,90;UBERON:0002405,4.66e-10,93;UBERON:0001434,2.34e-08,100 | |||
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| ||
|short_description=p@chr21:34931287..34931294,+ | |||
}} | }} |
Latest revision as of 17:29, 28 July 2015
Short description: | p@chr21:34931287..34931294, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:34931287..34931294, + |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.84e-34 | 168 |
hematopoietic cell | 1.34e-32 | 177 |
hematopoietic oligopotent progenitor cell | 2.74e-31 | 161 |
hematopoietic multipotent progenitor cell | 2.74e-31 | 161 |
leukocyte | 5.92e-30 | 136 |
nongranular leukocyte | 6.55e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 6.56e-27 | 120 |
classical monocyte | 1.19e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-20 | 42 |
myeloid cell | 2.59e-20 | 108 |
common myeloid progenitor | 2.59e-20 | 108 |
myeloid leukocyte | 1.64e-17 | 72 |
defensive cell | 3.81e-17 | 48 |
phagocyte | 3.81e-17 | 48 |
myeloid lineage restricted progenitor cell | 1.64e-16 | 66 |
macrophage dendritic cell progenitor | 3.94e-16 | 61 |
granulocyte monocyte progenitor cell | 5.22e-16 | 67 |
monopoietic cell | 2.84e-15 | 59 |
monocyte | 2.84e-15 | 59 |
monoblast | 2.84e-15 | 59 |
promonocyte | 2.84e-15 | 59 |
lymphocyte | 3.14e-10 | 53 |
common lymphoid progenitor | 3.14e-10 | 53 |
lymphoid lineage restricted progenitor cell | 8.46e-10 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.59e-16 | 98 |
blood island | 2.59e-16 | 98 |
hemolymphoid system | 1.31e-13 | 108 |
bone element | 1.35e-13 | 82 |
bone marrow | 3.21e-13 | 76 |
skeletal element | 9.28e-11 | 90 |
immune system | 4.66e-10 | 93 |
skeletal system | 2.34e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.42e-09 | 235 |
disease of cellular proliferation | 6.19e-09 | 239 |
organ system cancer | 1.29e-07 | 137 |