FFCP PHASE1:Hg19::chr20:60940898..60940914,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:60940898..60940914,- | |||
|description=CAGE_peak_at_chr20:60940898..60940914,- | |description=CAGE_peak_at_chr20:60940898..60940914,- | ||
|id=chr20:60940898..60940914,- | |id=chr20:60940898..60940914,- | ||
|ontology_enrichment_celltype=CL:0000066!1.59e-20!254;CL:0000076!1.41e-12!62;CL:0000077!8.87e-09!19 | |ontology_enrichment_celltype=CL:0000066!1.59e-20!254;CL:0000076!1.41e-12!62;CL:0000077!8.87e-09!19 | ||
|ontology_enrichment_celltype_v019=CL:0000313;3.50e-14;1!CL:0002149;2.72e-09;6!CL:0002255;2.72e-09;6!CL:1000746;5.47e-08;7!CL:1000612;5.47e-08;7!CL:0000159;9.86e-08;2!CL:0000650;1.75e-07;2!CL:1000500;1.75e-07;2!CL:1000618;1.75e-07;2!CL:1001318;1.75e-07;2!CL:0002173;1.75e-07;2!CL:1000415;1.75e-07;2 | |ontology_enrichment_celltype_v019=CL:0000313;3.50e-14;1!CL:0002149;2.72e-09;6!CL:0002255;2.72e-09;6!CL:1000746;5.47e-08;7!CL:1000612;5.47e-08;7!CL:0000159;9.86e-08;2!CL:0000650;1.75e-07;2!CL:1000500;1.75e-07;2!CL:1000618;1.75e-07;2!CL:1001318;1.75e-07;2!CL:0002173;1.75e-07;2!CL:1000415;1.75e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.08e-14,1;CL:0002149,2.45e-09,6;CL:0002255,2.45e-09,6;CL:1000746,6.08e-08,7;CL:1000612,6.08e-08,7;CL:0000159,9.25e-08,2;CL:1000415,1.36e-07,2;CL:0000650,2.40e-07,2;CL:1000500,2.40e-07,2;CL:1000618,2.40e-07,2;CL:1001318,2.40e-07,2;CL:0002173,2.40e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!7.41e-20!106;DOID:0050687!1.65e-13!143;DOID:162!3.22e-08!235;DOID:299!4.05e-08!25;DOID:14566!9.60e-08!239 | |ontology_enrichment_disease=DOID:305!7.41e-20!106;DOID:0050687!1.65e-13!143;DOID:162!3.22e-08!235;DOID:299!4.05e-08!25;DOID:14566!9.60e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:2152;3.50e-14;1!DOID:3112;1.10e-13;1!DOID:3001;2.72e-09;6!DOID:299;2.80e-08;25!DOID:1325;3.97e-08;7!DOID:3904;3.97e-08;7!DOID:3910;1.75e-07;2 | |ontology_enrichment_disease_v019=DOID:2152;3.50e-14;1!DOID:3112;1.10e-13;1!DOID:3001;2.72e-09;6!DOID:299;2.80e-08;25!DOID:1325;3.97e-08;7!DOID:3904;3.97e-08;7!DOID:3910;1.75e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:2152,3.08e-14,1;DOID:3112,1.10e-13,1;DOID:3001,2.45e-09,6;DOID:299,2.62e-08,25;DOID:1325,4.42e-08,7;DOID:3904,4.42e-08,7;DOID:3910,2.12e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.52e-12!155;UBERON:0001555!1.52e-12!155;UBERON:0007026!1.52e-12!155;UBERON:0004119!2.01e-12!169;UBERON:0000925!2.01e-12!169;UBERON:0006595!2.01e-12!169;UBERON:0000077!2.59e-11!130;UBERON:0004921!3.68e-11!129;UBERON:0004185!3.68e-11!129;UBERON:0001041!1.20e-10!98;UBERON:0005177!2.46e-09!107;UBERON:0000464!1.46e-08!104;UBERON:0000466!1.72e-08!126;UBERON:0001264!4.71e-08!10;UBERON:0003922!4.71e-08!10;UBERON:0003923!4.71e-08!10;UBERON:0003924!4.71e-08!10;UBERON:0003921!4.71e-08!10;UBERON:0000065!1.35e-07!53;UBERON:0008947!2.27e-07!38;UBERON:0003258!2.27e-07!38;UBERON:0002075!2.35e-07!18;UBERON:0002114!2.51e-07!12;UBERON:0001045!3.51e-07!11;UBERON:0005911!4.09e-07!82;UBERON:0001004!9.06e-07!72 | |ontology_enrichment_uberon=UBERON:0001007!1.52e-12!155;UBERON:0001555!1.52e-12!155;UBERON:0007026!1.52e-12!155;UBERON:0004119!2.01e-12!169;UBERON:0000925!2.01e-12!169;UBERON:0006595!2.01e-12!169;UBERON:0000077!2.59e-11!130;UBERON:0004921!3.68e-11!129;UBERON:0004185!3.68e-11!129;UBERON:0001041!1.20e-10!98;UBERON:0005177!2.46e-09!107;UBERON:0000464!1.46e-08!104;UBERON:0000466!1.72e-08!126;UBERON:0001264!4.71e-08!10;UBERON:0003922!4.71e-08!10;UBERON:0003923!4.71e-08!10;UBERON:0003924!4.71e-08!10;UBERON:0003921!4.71e-08!10;UBERON:0000065!1.35e-07!53;UBERON:0008947!2.27e-07!38;UBERON:0003258!2.27e-07!38;UBERON:0002075!2.35e-07!18;UBERON:0002114!2.51e-07!12;UBERON:0001045!3.51e-07!11;UBERON:0005911!4.09e-07!82;UBERON:0001004!9.06e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001264;2.61e-20;10!UBERON:0002075;2.63e-17;18!UBERON:0004911;3.50e-14;1!UBERON:0000996;1.10e-13;1!UBERON:0000949;1.21e-09;43!UBERON:0000074;5.47e-08;7!UBERON:0001229;5.47e-08;7!UBERON:0004909;9.86e-08;2!UBERON:0002323;1.07e-07;45!UBERON:0004903;1.75e-07;2!UBERON:0003567;1.75e-07;2!UBERON:0003838;1.75e-07;2!UBERON:0003586;1.75e-07;2!UBERON:0005169;1.75e-07;2!UBERON:0002321;1.75e-07;2!UBERON:0005215;1.75e-07;2!UBERON:0002303;1.75e-07;2!UBERON:0002319;1.75e-07;2!UBERON:0002173;1.75e-07;2!UBERON:0002186;1.75e-07;2!UBERON:0003975;8.58e-07;18!UBERON:0002553;9.62e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0001264;2.61e-20;10!UBERON:0002075;2.63e-17;18!UBERON:0004911;3.50e-14;1!UBERON:0000996;1.10e-13;1!UBERON:0000949;1.21e-09;43!UBERON:0000074;5.47e-08;7!UBERON:0001229;5.47e-08;7!UBERON:0004909;9.86e-08;2!UBERON:0002323;1.07e-07;45!UBERON:0004903;1.75e-07;2!UBERON:0003567;1.75e-07;2!UBERON:0003838;1.75e-07;2!UBERON:0003586;1.75e-07;2!UBERON:0005169;1.75e-07;2!UBERON:0002321;1.75e-07;2!UBERON:0005215;1.75e-07;2!UBERON:0002303;1.75e-07;2!UBERON:0002319;1.75e-07;2!UBERON:0002173;1.75e-07;2!UBERON:0002186;1.75e-07;2!UBERON:0003975;8.58e-07;18!UBERON:0002553;9.62e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,2.55e-20,10;UBERON:0002075,2.26e-17,18;UBERON:0004911,3.08e-14,1;UBERON:0003886,5.27e-14,54;UBERON:0000996,1.42e-13,1;UBERON:0002553,2.63e-12,61;UBERON:0005177,4.16e-11,101;UBERON:0000949,1.20e-09,45;UBERON:0002323,1.57e-09,46;UBERON:0004458,6.33e-09,49;UBERON:0010532,6.08e-08,7;UBERON:0000074,6.08e-08,7;UBERON:0001229,6.08e-08,7;UBERON:0001230,6.08e-08,7;UBERON:0003220,6.08e-08,7;UBERON:0005749,6.08e-08,7;UBERON:0004199,6.08e-08,7;UBERON:0004209,6.08e-08,7;UBERON:0004198,6.08e-08,7;UBERON:0004909,9.25e-08,2;UBERON:0004903,2.12e-07,2;UBERON:0002173,2.12e-07,2;UBERON:0002186,2.12e-07,2;UBERON:0003567,2.40e-07,2;UBERON:0003838,2.40e-07,2;UBERON:0003586,2.40e-07,2;UBERON:0005169,2.40e-07,2;UBERON:0002321,2.40e-07,2;UBERON:0005215,2.40e-07,2;UBERON:0002303,2.40e-07,2;UBERON:0002319,2.40e-07,2;UBERON:0005103,4.69e-07,8;UBERON:0000083,4.69e-07,8;UBERON:0009201,4.69e-07,8;UBERON:0006553,4.69e-07,8;UBERON:0003074,4.69e-07,8;UBERON:0003060,4.69e-07,8 | |||
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|short_description=p@chr20:60940898..60940914,- | |short_description=p@chr20:60940898..60940914,- | ||
}} | }} |
Latest revision as of 16:08, 28 July 2015
Short description: | p@chr20:60940898..60940914, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:60940898..60940914, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.08e-14 | 1 |
epithelial cell of uterus | 2.45e-09 | 6 |
stromal cell of endometrium | 2.45e-09 | 6 |
glomerular cell | 6.08e-08 | 7 |
kidney corpuscule cell | 6.08e-08 | 7 |
seromucus secreting cell | 9.25e-08 | 2 |
epithelial cell of gall bladder | 1.36e-07 | 2 |
mesangial cell | 2.40e-07 | 2 |
kidney interstitial cell | 2.40e-07 | 2 |
juxtaglomerular complex cell | 2.40e-07 | 2 |
renal interstitial pericyte | 2.40e-07 | 2 |
extraglomerular mesangial cell | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.08e-14 | 1 |
papillary adenocarcinoma | 1.10e-13 | 1 |
female reproductive endometrioid cancer | 2.45e-09 | 6 |
adenocarcinoma | 2.62e-08 | 25 |
bronchus cancer | 4.42e-08 | 7 |
bronchogenic carcinoma | 4.42e-08 | 7 |
lung adenocarcinoma | 2.12e-07 | 2 |