FFCP PHASE1:Hg19::chr20:5904344..5904383,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:5904344..5904383,+ | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5904344..5904383,+ | |||
|id=chr20:5904344..5904383,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.03e-17;1!CL:0000164;1.03e-17;1!CL:0000502;1.03e-17;1!CL:0000172;1.03e-17;1!CL:0000173;1.03e-17;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.44e-17,1;CL:0000164,1.44e-17,1;CL:0000502,1.44e-17,1;CL:0000172,1.44e-17,1;CL:0000173,1.44e-17,1;CL:0002351,1.44e-17,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.98e-23;3!CL:0002351;1.03e-17;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.03e-17;1!DOID:3119;2.20e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.44e-17,1;DOID:3119,2.45e-11,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003296;1.11e-37;4!UBERON:0010133;1.11e-37;4!UBERON:0000007;4.28e-34;2!UBERON:0001894;7.05e-22;7!UBERON:0002037;6.70e-12;6!UBERON:0000073;3.50e-10;53!UBERON:0002616;3.50e-10;53!UBERON:0002771;1.07e-09;2!UBERON:0000955;1.24e-09;68!UBERON:0001905;1.57e-09;2!UBERON:0001954;1.57e-09;2!UBERON:0002757;1.57e-09;2!UBERON:0010134;1.57e-09;2!UBERON:0003022;1.57e-09;2!UBERON:0005408;1.57e-09;2!UBERON:0002421;1.57e-09;2!UBERON:0001899;1.57e-09;2!UBERON:0002600;1.57e-09;2!UBERON:0002680;3.07e-08;9!UBERON:0001895;3.07e-08;9!UBERON:0002780;3.76e-07;41!UBERON:0001890;3.76e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,7.63e-38,4;UBERON:0010133,7.63e-38,4;UBERON:0000007,3.62e-34,2;UBERON:0001894,5.69e-22,7;UBERON:0006222,5.69e-22,7;UBERON:0000073,1.23e-14,53;UBERON:0002616,1.23e-14,53;UBERON:0001049,7.60e-14,56;UBERON:0005068,7.60e-14,56;UBERON:0006241,7.60e-14,56;UBERON:0007135,7.60e-14,56;UBERON:0002037,6.00e-12,6;UBERON:0006215,6.00e-12,6;UBERON:0000955,3.33e-11,68;UBERON:0006238,3.33e-11,68;UBERON:0002780,6.18e-10,41;UBERON:0001890,6.18e-10,41;UBERON:0003080,6.18e-10,41;UBERON:0006240,6.18e-10,41;UBERON:0002771,1.03e-09,2;UBERON:0001905,1.33e-09,2;UBERON:0002757,1.33e-09,2;UBERON:0010134,1.33e-09,2;UBERON:0005408,1.33e-09,2;UBERON:0001899,1.33e-09,2;UBERON:0001954,1.57e-09,2;UBERON:0003022,1.57e-09,2;UBERON:0002421,1.57e-09,2;UBERON:0002600,1.57e-09,2;UBERON:0001017,2.21e-09,81;UBERON:0003075,2.21e-09,82;UBERON:0007284,2.21e-09,82;UBERON:0002346,6.24e-09,86;UBERON:0001016,2.02e-08,89;UBERON:0002680,2.85e-08,9;UBERON:0001895,2.85e-08,9;UBERON:0010092,2.85e-08,9;UBERON:0010371,2.55e-07,104 | |||
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| ||
|short_description=p@chr20:5904344..5904383,+ | |||
}} | }} |
Latest revision as of 16:02, 28 July 2015
Short description: | p@chr20:5904344..5904383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5904344..5904383, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.44e-17 | 1 |
enteroendocrine cell | 1.44e-17 | 1 |
type D enteroendocrine cell | 1.44e-17 | 1 |
somatostatin secreting cell | 1.44e-17 | 1 |
pancreatic D cell | 1.44e-17 | 1 |
progenitor cell of endocrine pancreas | 1.44e-17 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.44e-17 | 1 |
gastrointestinal system cancer | 2.45e-11 | 14 |