FFCP PHASE1:Hg19::chr20:5903888..5903912,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:5903888..5903912,- | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903888..5903912,- | |||
|id=chr20:5903888..5903912,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.97e-14;1!CL:0000164;1.97e-14;1!CL:0000502;1.97e-14;1!CL:0000172;1.97e-14;1!CL:0000173;1.97e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.41e-14,1;CL:0000164,2.41e-14,1;CL:0000502,2.41e-14,1;CL:0000172,2.41e-14,1;CL:0000173,2.41e-14,1;CL:0002351,2.41e-14,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.54e-19;3!CL:0002351;1.97e-14;1!UBERON:0010227;1.97e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.97e-14;1!DOID:169;1.10e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.41e-14,1;DOID:169,1.10e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.74e-49!57;UBERON:0005068!2.74e-49!57;UBERON:0006241!2.74e-49!57;UBERON:0007135!2.74e-49!57;UBERON:0002616!2.18e-44!59;UBERON:0000955!3.50e-44!69;UBERON:0006238!3.50e-44!69;UBERON:0001017!2.31e-40!82;UBERON:0005743!4.66e-38!86;UBERON:0000073!5.45e-38!94;UBERON:0001016!5.45e-38!94;UBERON:0002780!6.27e-37!41;UBERON:0001890!6.27e-37!41;UBERON:0006240!6.27e-37!41;UBERON:0003075!5.33e-36!86;UBERON:0007284!5.33e-36!86;UBERON:0003080!6.61e-36!42;UBERON:0002346!5.62e-34!90;UBERON:0007023!8.84e-32!115;UBERON:0001893!1.08e-27!34;UBERON:0002020!1.11e-27!34;UBERON:0003528!1.11e-27!34;UBERON:0001869!8.28e-27!32;UBERON:0002791!1.05e-25!33;UBERON:0002619!5.58e-25!22;UBERON:0003056!6.97e-25!61;UBERON:0001950!6.65e-24!20;UBERON:0000033!8.16e-24!123;UBERON:0000153!2.89e-22!129;UBERON:0007811!2.89e-22!129;UBERON:0000956!1.19e-21!25;UBERON:0000203!1.19e-21!25;UBERON:0004121!2.57e-20!169;UBERON:0000924!1.32e-19!173;UBERON:0006601!1.32e-19!173;UBERON:0001872!8.31e-15!5;UBERON:0004733!2.22e-14!12;UBERON:0002028!2.22e-14!12;UBERON:0007277!2.22e-14!12;UBERON:0003076!4.35e-14!15;UBERON:0003057!4.35e-14!15;UBERON:0004732!3.66e-13!13;UBERON:0003296!4.70e-13!4;UBERON:0010133!4.70e-13!4;UBERON:0000025!9.86e-12!194;UBERON:0002680!1.23e-11!9;UBERON:0001895!1.23e-11!9;UBERON:0010092!1.23e-11!9;UBERON:0001894!4.47e-11!7;UBERON:0006222!4.47e-11!7;UBERON:0000988!3.51e-09!3;UBERON:0002298!1.97e-08!8;UBERON:0004111!2.37e-08!241;UBERON:0000064!6.10e-08!219;UBERON:0000200!8.41e-08!6;UBERON:0000483!8.91e-08!309;UBERON:0000007!1.21e-07!2;UBERON:0000119!1.32e-07!312;UBERON:0002308!1.80e-07!9;UBERON:0000125!1.80e-07!9;UBERON:0000477!2.56e-07!286;UBERON:0001905!4.38e-07!2;UBERON:0002757!4.38e-07!2;UBERON:0010134!4.38e-07!2;UBERON:0002784!4.38e-07!2;UBERON:0005408!4.38e-07!2;UBERON:0001899!4.38e-07!2;UBERON:0000369!6.33e-07!4;UBERON:0002435!6.33e-07!4;UBERON:0000204!6.33e-07!4;UBERON:0010082!6.33e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.35e-30;4!UBERON:0010133;1.35e-30;4!UBERON:0000007;6.20e-28;2!UBERON:0001894;8.54e-18;7!UBERON:0002079;1.97e-14;1!UBERON:0002680;5.52e-14;9!UBERON:0001895;5.52e-14;9!UBERON:0000073;2.43e-11;53!UBERON:0002616;2.43e-11;53!UBERON:0000955;2.66e-11;68!UBERON:0004733;1.23e-10;12!UBERON:0002028;1.23e-10;12!UBERON:0002037;5.68e-10;6!UBERON:0004732;7.33e-10;13!UBERON:0001016;3.81e-09;83!UBERON:0001905;7.27e-08;2!UBERON:0002757;7.27e-08;2!UBERON:0010134;7.27e-08;2!UBERON:0002081;7.27e-08;2!UBERON:0005408;7.27e-08;2!UBERON:0001899;7.27e-08;2!UBERON:0002780;5.04e-07;41!UBERON:0001890;5.04e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.12e-30,4;UBERON:0010133,2.12e-30,4;UBERON:0000007,7.10e-28,2;UBERON:0001894,1.10e-17,7;UBERON:0006222,1.10e-17,7;UBERON:0000073,5.93e-15,53;UBERON:0002616,5.93e-15,53;UBERON:0002079,1.84e-14,1;UBERON:0000955,2.18e-14,68;UBERON:0006238,2.18e-14,68;UBERON:0001049,3.97e-14,56;UBERON:0005068,3.97e-14,56;UBERON:0006241,3.97e-14,56;UBERON:0007135,3.97e-14,56;UBERON:0002680,4.73e-14,9;UBERON:0001895,4.73e-14,9;UBERON:0010092,4.73e-14,9;UBERON:0001016,2.82e-13,89;UBERON:0001017,5.50e-12,81;UBERON:0004733,1.10e-10,12;UBERON:0002028,1.10e-10,12;UBERON:0007277,1.10e-10,12;UBERON:0002037,5.43e-10,6;UBERON:0006215,5.43e-10,6;UBERON:0004732,6.59e-10,13;UBERON:0003075,1.84e-09,82;UBERON:0007284,1.84e-09,82;UBERON:0002346,5.44e-09,86;UBERON:0003076,1.17e-08,15;UBERON:0003057,1.17e-08,15;UBERON:0007023,1.79e-08,114;UBERON:0002081,7.03e-08,2;UBERON:0010227,7.03e-08,2;UBERON:0002780,8.25e-08,41;UBERON:0001890,8.25e-08,41;UBERON:0003080,8.25e-08,41;UBERON:0006240,8.25e-08,41;UBERON:0001905,9.19e-08,2;UBERON:0002757,9.19e-08,2;UBERON:0010134,9.19e-08,2;UBERON:0005408,9.19e-08,2;UBERON:0001899,9.19e-08,2;UBERON:0010371,2.61e-07,104;UBERON:0010314,4.32e-07,132 | |||
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|short_description=p@chr20:5903888..5903912,- | |||
}} |
Latest revision as of 16:01, 28 July 2015
Short description: | p@chr20:5903888..5903912, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903888..5903912, - |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.41e-14 | 1 |
enteroendocrine cell | 2.41e-14 | 1 |
type D enteroendocrine cell | 2.41e-14 | 1 |
somatostatin secreting cell | 2.41e-14 | 1 |
pancreatic D cell | 2.41e-14 | 1 |
progenitor cell of endocrine pancreas | 2.41e-14 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.41e-14 | 1 |
neuroendocrine tumor | 1.10e-09 | 6 |