FFCP PHASE1:Hg19::chr20:5903646..5903656,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:5903646..5903656,+ | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903646..5903656,+ | |||
|id=chr20:5903646..5903656,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.19e-38;3 | |||
|ontology_enrichment_disease=DOID:3119!2.18e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:3119;3.72e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.72e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.06e-51!57;UBERON:0005068!1.06e-51!57;UBERON:0006241!1.06e-51!57;UBERON:0007135!1.06e-51!57;UBERON:0002616!4.18e-42!59;UBERON:0001017!1.14e-39!82;UBERON:0000073!7.63e-39!94;UBERON:0001016!7.63e-39!94;UBERON:0000955!8.05e-38!69;UBERON:0006238!8.05e-38!69;UBERON:0005743!1.45e-37!86;UBERON:0003075!3.47e-35!86;UBERON:0007284!3.47e-35!86;UBERON:0002346!2.35e-33!90;UBERON:0007023!1.07e-31!115;UBERON:0002780!6.35e-31!41;UBERON:0001890!6.35e-31!41;UBERON:0006240!6.35e-31!41;UBERON:0002619!3.05e-30!22;UBERON:0003080!4.17e-30!42;UBERON:0002020!2.64e-29!34;UBERON:0003528!2.64e-29!34;UBERON:0001950!2.19e-28!20;UBERON:0001869!3.73e-27!32;UBERON:0000956!1.97e-26!25;UBERON:0000203!1.97e-26!25;UBERON:0001893!2.06e-25!34;UBERON:0000033!2.23e-24!123;UBERON:0003076!5.72e-24!15;UBERON:0003057!5.72e-24!15;UBERON:0000153!5.85e-23!129;UBERON:0007811!5.85e-23!129;UBERON:0002791!7.87e-23!33;UBERON:0004121!1.99e-20!169;UBERON:0000924!8.39e-20!173;UBERON:0006601!8.39e-20!173;UBERON:0003056!1.34e-19!61;UBERON:0002680!7.82e-19!9;UBERON:0001895!7.82e-19!9;UBERON:0010092!7.82e-19!9;UBERON:0004733!1.72e-18!12;UBERON:0002028!1.72e-18!12;UBERON:0007277!1.72e-18!12;UBERON:0004732!5.38e-17!13;UBERON:0000988!8.36e-15!3;UBERON:0000025!2.81e-13!194;UBERON:0000200!3.31e-12!6;UBERON:0003296!8.65e-12!4;UBERON:0010133!8.65e-12!4;UBERON:0004111!2.35e-11!241;UBERON:0000007!5.03e-11!2;UBERON:0002148!3.21e-10!2;UBERON:0009662!3.21e-10!2;UBERON:0002298!2.26e-09!8;UBERON:0000477!2.37e-09!286;UBERON:0001871!3.28e-09!7;UBERON:0002021!6.69e-09!5;UBERON:0001872!1.46e-08!5;UBERON:0002037!5.68e-08!6;UBERON:0006215!5.68e-08!6;UBERON:0000483!2.09e-07!309;UBERON:0000119!2.85e-07!312;UBERON:0000064!2.94e-07!219;UBERON:0002240!3.44e-07!3;UBERON:0000475!3.81e-07!365;UBERON:0002771!3.89e-07!3;UBERON:0006331!4.39e-07!3;UBERON:0001894!6.68e-07!7;UBERON:0006222!6.68e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.13e-57;2!UBERON:0003296;3.40e-29;4!UBERON:0010133;3.40e-29;4!UBERON:0002680;1.05e-28;9!UBERON:0001895;1.05e-28;9!UBERON:0004733;9.36e-22;12!UBERON:0002028;9.36e-22;12!UBERON:0004732;3.79e-20;13!UBERON:0002037;1.04e-19;6!UBERON:0001894;3.56e-17;7!UBERON:0000073;3.39e-11;53!UBERON:0002616;3.39e-11;53!UBERON:0000988;1.04e-10;3!UBERON:0000955;2.68e-08;68!UBERON:0001016;7.69e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.77e-57,2;UBERON:0003296,3.65e-29,4;UBERON:0010133,3.65e-29,4;UBERON:0002680,9.98e-29,9;UBERON:0001895,9.98e-29,9;UBERON:0010092,9.98e-29,9;UBERON:0004733,9.03e-22,12;UBERON:0002028,9.03e-22,12;UBERON:0007277,9.03e-22,12;UBERON:0004732,3.67e-20,13;UBERON:0002037,8.63e-20,6;UBERON:0006215,8.63e-20,6;UBERON:0003076,1.38e-17,15;UBERON:0003057,1.38e-17,15;UBERON:0001894,3.71e-17,7;UBERON:0006222,3.71e-17,7;UBERON:0000073,2.12e-13,53;UBERON:0002616,2.12e-13,53;UBERON:0001049,1.03e-12,56;UBERON:0005068,1.03e-12,56;UBERON:0006241,1.03e-12,56;UBERON:0007135,1.03e-12,56;UBERON:0000988,1.20e-10,3;UBERON:0000955,2.05e-10,68;UBERON:0006238,2.05e-10,68;UBERON:0001017,7.91e-09,81;UBERON:0003075,7.91e-09,82;UBERON:0007284,7.91e-09,82;UBERON:0002346,1.96e-08,86;UBERON:0001016,5.46e-08,89;UBERON:0010371,4.99e-07,104 | |||
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|short_description=p@chr20:5903646..5903656,+ | |||
}} | }} |
Latest revision as of 16:01, 28 July 2015
Short description: | p@chr20:5903646..5903656, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903646..5903656, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.77e-57 | 2 |
gland of diencephalon | 3.65e-29 | 4 |
neuroendocrine gland | 3.65e-29 | 4 |
regional part of metencephalon | 9.98e-29 | 9 |
metencephalon | 9.98e-29 | 9 |
future metencephalon | 9.98e-29 | 9 |
segmental subdivision of hindbrain | 9.03e-22 | 12 |
hindbrain | 9.03e-22 | 12 |
presumptive hindbrain | 9.03e-22 | 12 |
segmental subdivision of nervous system | 3.67e-20 | 13 |
cerebellum | 8.63e-20 | 6 |
rhombic lip | 8.63e-20 | 6 |
posterior neural tube | 1.38e-17 | 15 |
chordal neural plate | 1.38e-17 | 15 |
diencephalon | 3.71e-17 | 7 |
future diencephalon | 3.71e-17 | 7 |
regional part of nervous system | 2.12e-13 | 53 |
regional part of brain | 2.12e-13 | 53 |
neural tube | 1.03e-12 | 56 |
neural rod | 1.03e-12 | 56 |
future spinal cord | 1.03e-12 | 56 |
neural keel | 1.03e-12 | 56 |
pons | 1.20e-10 | 3 |
brain | 2.05e-10 | 68 |
future brain | 2.05e-10 | 68 |
central nervous system | 7.91e-09 | 81 |
neural plate | 7.91e-09 | 82 |
presumptive neural plate | 7.91e-09 | 82 |
neurectoderm | 1.96e-08 | 86 |
nervous system | 5.46e-08 | 89 |
ecto-epithelium | 4.99e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.72e-09 | 14 |