FFCP PHASE1:Hg19::chr20:52225019..52225047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:52225019..52225047,- | |||
|coexpression_cluster_id=C925 | |||
|description=CAGE_peak_at_chr20:52225019..52225047,- | |description=CAGE_peak_at_chr20:52225019..52225047,- | ||
|id=chr20:52225019..52225047,- | |id=chr20:52225019..52225047,- | ||
|ontology_enrichment_celltype=CL:0000039!8.24e-21!7;CL:0000586!8.24e-21!7;CL:0002322!3.85e-13!5;CL:0002541!2.46e-09!3 | |ontology_enrichment_celltype=CL:0000039!8.24e-21!7;CL:0000586!8.24e-21!7;CL:0002322!3.85e-13!5;CL:0002541!2.46e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.79e-47;7!CL:0000586;6.79e-47;7!CL:0002541;8.43e-20;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.79e-47,7;CL:0000586,6.79e-47,7;CL:0002541,8.43e-20,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.86e-11;10!UBERON:0005564;3.86e-11;10!UBERON:0003124;6.52e-08;1 | |||
|ontology_enrichment_disease=DOID:3095!2.12e-09!22;DOID:2994!2.12e-09!22;DOID:1036!8.43e-09!8 | |ontology_enrichment_disease=DOID:3095!2.12e-09!22;DOID:2994!2.12e-09!22;DOID:1036!8.43e-09!8 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.62e-23;22!DOID:2994;2.62e-23;22!DOID:1036;8.90e-20;8!DOID:8692;3.78e-12;31!DOID:1240;1.94e-08;39!DOID:1799;3.80e-08;1!DOID:10165;3.80e-08;1!DOID:1798;3.80e-08;1!DOID:8552;6.52e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.59e-23,22;DOID:2994,2.59e-23,22;DOID:1036,9.64e-20,8;DOID:8692,5.18e-12,31;DOID:162,3.76e-10,235;DOID:14566,7.60e-10,239;DOID:1240,2.56e-09,39;DOID:1799,3.80e-08,1;DOID:10165,3.80e-08,1;DOID:1798,3.80e-08,1;DOID:8552,6.97e-08,1;DOID:2531,7.26e-07,51;DOID:0060083,7.26e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.98e-14!14;UBERON:0000158!3.98e-14!14;UBERON:0000473!1.23e-12!8;UBERON:0000476!2.46e-09!3;UBERON:0000920!2.46e-09!3;UBERON:0000305!4.95e-09!7;UBERON:0003135!5.89e-09!11;UBERON:0004871!7.39e-08!8;UBERON:0000478!1.71e-07!24;UBERON:0003124!8.35e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!3.98e-14!14;UBERON:0000158!3.98e-14!14;UBERON:0000473!1.23e-12!8;UBERON:0000476!2.46e-09!3;UBERON:0000920!2.46e-09!3;UBERON:0000305!4.95e-09!7;UBERON:0003135!5.89e-09!11;UBERON:0004871!7.39e-08!8;UBERON:0000478!1.71e-07!24;UBERON:0003124!8.35e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;8.43e-20;3!UBERON:0000920;8.43e-20;3!UBERON:0000473;6.78e-14;8!UBERON:0003135;3.90e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,8.43e-20,3;UBERON:0003124,5.66e-15,7;UBERON:0000473,6.78e-14,8;UBERON:0003135,3.90e-10,11;UBERON:0005631,1.49e-07,14;UBERON:0000158,1.49e-07,14 | |||
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| ||
|short_description=p@chr20:52225019..52225047,- | |short_description=p@chr20:52225019..52225047,- | ||
}} | }} |
Latest revision as of 15:29, 28 July 2015
Short description: | p@chr20:52225019..52225047, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:52225019..52225047, - |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.79e-47 | 7 |
germ cell | 6.79e-47 | 7 |
chorionic membrane mesenchymal stem cell | 8.43e-20 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 8.43e-20 | 3 |
chorion | 5.66e-15 | 7 |
testis | 6.78e-14 | 8 |
male reproductive organ | 3.90e-10 | 11 |
extraembryonic membrane | 1.49e-07 | 14 |
membranous layer | 1.49e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.59e-23 | 22 |
germ cell cancer | 2.59e-23 | 22 |
chronic leukemia | 9.64e-20 | 8 |
myeloid leukemia | 5.18e-12 | 31 |
cancer | 3.76e-10 | 235 |
disease of cellular proliferation | 7.60e-10 | 239 |
leukemia | 2.56e-09 | 39 |
islet cell tumor | 3.80e-08 | 1 |
endocrine pancreas cancer | 3.80e-08 | 1 |
pancreatic endocrine carcinoma | 3.80e-08 | 1 |
chronic myeloid leukemia | 6.97e-08 | 1 |
hematologic cancer | 7.26e-07 | 51 |
immune system cancer | 7.26e-07 | 51 |