FFCP PHASE1:Hg19::chr20:50245629..50245639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:50245629..50245639,- | |||
|description=CAGE_peak_at_chr20:50245629..50245639,- | |description=CAGE_peak_at_chr20:50245629..50245639,- | ||
|id=chr20:50245629..50245639,- | |id=chr20:50245629..50245639,- | ||
|ontology_enrichment_celltype=CL:0000064!1.29e-19!3;CL:0005012!1.29e-19!3;CL:0000067!1.29e-19!3;CL:0002304!1.29e-19!3;CL:0000708!2.27e-19!3;CL:0000075!4.63e-08!27;CL:0002379!5.58e-08!1;CL:0000342!7.26e-08!1;CL:0002565!7.26e-08!1;CL:0000306!1.86e-07!4;CL:0002222!1.86e-07!4;CL:0002224!1.86e-07!4 | |ontology_enrichment_celltype=CL:0000064!1.29e-19!3;CL:0005012!1.29e-19!3;CL:0000067!1.29e-19!3;CL:0002304!1.29e-19!3;CL:0000708!2.27e-19!3;CL:0000075!4.63e-08!27;CL:0002379!5.58e-08!1;CL:0000342!7.26e-08!1;CL:0002565!7.26e-08!1;CL:0000306!1.86e-07!4;CL:0002222!1.86e-07!4;CL:0002224!1.86e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002379;4.27e-34;1!CL:0000182;2.05e-25;12!CL:0000306;1.38e-09;4!CL:0002222;1.38e-09;4!CL:0002224;1.38e-09;4 | |ontology_enrichment_celltype_v019=CL:0002379;4.27e-34;1!CL:0000182;2.05e-25;12!CL:0000306;1.38e-09;4!CL:0002222;1.38e-09;4!CL:0002224;1.38e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002379,7.06e-34,1;CL:0000182,2.32e-25,12;CL:0000306,1.32e-09,4;CL:0002222,1.32e-09,4;CL:0002224,1.32e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.22e-27;11!UBERON:0009497;1.56e-23;13!UBERON:0001041;1.15e-10;30!UBERON:0003104;3.90e-10;31!UBERON:0007123;6.33e-08;5 | |ontology_enrichment_development_v019=UBERON:0004161;1.22e-27;11!UBERON:0009497;1.56e-23;13!UBERON:0001041;1.15e-10;30!UBERON:0003104;3.90e-10;31!UBERON:0007123;6.33e-08;5 | ||
|ontology_enrichment_disease=DOID:3620!5.58e-08!1;DOID:3565!5.58e-08!1;DOID:2355!2.63e-07!1 | |ontology_enrichment_disease=DOID:3620!5.58e-08!1;DOID:3565!5.58e-08!1;DOID:2355!2.63e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3620;4.27e-34;1!DOID:3565;4.27e-34;1!DOID:7;2.24e-15;39 | |ontology_enrichment_disease_v019=DOID:3620;4.27e-34;1!DOID:3565;4.27e-34;1!DOID:7;2.24e-15;39 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,7.06e-34,1;DOID:3565,7.06e-34,1;DOID:7,3.95e-14,39 | |||
|ontology_enrichment_uberon=UBERON:0000488!9.76e-26!4;UBERON:0007625!1.58e-20!11;UBERON:0001778!1.29e-19!3;UBERON:0001775!1.29e-19!3;UBERON:0003210!2.27e-19!3;UBERON:0002203!3.09e-17!6;UBERON:0001768!3.09e-17!6;UBERON:0001801!5.08e-16!14;UBERON:0000019!1.16e-11!19;UBERON:0000047!1.16e-11!19;UBERON:0004088!1.16e-11!19;UBERON:0003072!1.16e-11!19;UBERON:0003071!1.16e-11!19;UBERON:0004128!1.16e-11!19;UBERON:0000970!4.73e-11!20;UBERON:0002104!1.69e-10!21;UBERON:0001456!1.69e-10!21;UBERON:0000020!1.55e-09!23;UBERON:0002200!1.82e-09!11;UBERON:0006876!1.82e-09!11;UBERON:0001032!4.09e-09!24;UBERON:0004456!4.09e-09!24;UBERON:0002506!7.26e-08!1;UBERON:0001769!7.26e-08!1;UBERON:0002135!8.84e-08!1;UBERON:0003112!1.58e-07!1;UBERON:0000032!1.58e-07!1;UBERON:0005253!1.58e-07!1;UBERON:0003128!1.58e-07!1;UBERON:0002241!1.58e-07!1;UBERON:0001703!1.58e-07!1;UBERON:0004761!1.58e-07!1;UBERON:0009617!1.58e-07!1;UBERON:0010077!1.86e-07!4;UBERON:0005389!1.86e-07!4;UBERON:0000484!1.86e-07!4;UBERON:0002546!1.86e-07!4;UBERON:0000965!1.86e-07!4;UBERON:0001803!1.86e-07!4;UBERON:0003073!1.86e-07!4;UBERON:0005426!1.86e-07!4;UBERON:0005085!1.91e-07!29;UBERON:0001048!1.96e-07!168 | |ontology_enrichment_uberon=UBERON:0000488!9.76e-26!4;UBERON:0007625!1.58e-20!11;UBERON:0001778!1.29e-19!3;UBERON:0001775!1.29e-19!3;UBERON:0003210!2.27e-19!3;UBERON:0002203!3.09e-17!6;UBERON:0001768!3.09e-17!6;UBERON:0001801!5.08e-16!14;UBERON:0000019!1.16e-11!19;UBERON:0000047!1.16e-11!19;UBERON:0004088!1.16e-11!19;UBERON:0003072!1.16e-11!19;UBERON:0003071!1.16e-11!19;UBERON:0004128!1.16e-11!19;UBERON:0000970!4.73e-11!20;UBERON:0002104!1.69e-10!21;UBERON:0001456!1.69e-10!21;UBERON:0000020!1.55e-09!23;UBERON:0002200!1.82e-09!11;UBERON:0006876!1.82e-09!11;UBERON:0001032!4.09e-09!24;UBERON:0004456!4.09e-09!24;UBERON:0002506!7.26e-08!1;UBERON:0001769!7.26e-08!1;UBERON:0002135!8.84e-08!1;UBERON:0003112!1.58e-07!1;UBERON:0000032!1.58e-07!1;UBERON:0005253!1.58e-07!1;UBERON:0003128!1.58e-07!1;UBERON:0002241!1.58e-07!1;UBERON:0001703!1.58e-07!1;UBERON:0004761!1.58e-07!1;UBERON:0009617!1.58e-07!1;UBERON:0010077!1.86e-07!4;UBERON:0005389!1.86e-07!4;UBERON:0000484!1.86e-07!4;UBERON:0002546!1.86e-07!4;UBERON:0000965!1.86e-07!4;UBERON:0001803!1.86e-07!4;UBERON:0003073!1.86e-07!4;UBERON:0005426!1.86e-07!4;UBERON:0005085!1.91e-07!29;UBERON:0001048!1.96e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.21e-16;19!UBERON:0006925;2.21e-16;19!UBERON:0002368;3.70e-15;33!UBERON:0002423;1.20e-12;25!UBERON:0000949;4.21e-11;43!UBERON:0002365;1.32e-09;31!UBERON:0002330;1.32e-09;31!UBERON:0010077;1.38e-09;4!UBERON:0005389;1.38e-09;4!UBERON:0000484;1.38e-09;4!UBERON:0000965;1.38e-09;4!UBERON:0001803;1.38e-09;4!UBERON:0002046;6.33e-08;5!UBERON:0002530;2.24e-07;57 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.21e-16;19!UBERON:0006925;2.21e-16;19!UBERON:0002368;3.70e-15;33!UBERON:0002423;1.20e-12;25!UBERON:0000949;4.21e-11;43!UBERON:0002365;1.32e-09;31!UBERON:0002330;1.32e-09;31!UBERON:0010077;1.38e-09;4!UBERON:0005389;1.38e-09;4!UBERON:0000484;1.38e-09;4!UBERON:0000965;1.38e-09;4!UBERON:0001803;1.38e-09;4!UBERON:0002046;6.33e-08;5!UBERON:0002530;2.24e-07;57 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.39e-16,19;UBERON:0006925,2.39e-16,19;UBERON:0008836,2.39e-16,19;UBERON:0002368,1.13e-15,35;UBERON:0008835,3.13e-14,22;UBERON:0003894,3.13e-14,22;UBERON:0009854,1.20e-13,23;UBERON:0007499,1.28e-12,25;UBERON:0009497,1.28e-12,25;UBERON:0000015,1.28e-12,25;UBERON:0002423,1.28e-12,25;UBERON:0006235,1.28e-12,25;UBERON:0004161,1.28e-12,25;UBERON:0000949,2.51e-12,45;UBERON:0009856,3.64e-12,26;UBERON:0003929,2.28e-10,54;UBERON:0002365,2.52e-10,31;UBERON:0002330,2.52e-10,31;UBERON:0010077,1.32e-09,4;UBERON:0005389,1.32e-09,4;UBERON:0000484,1.32e-09,4;UBERON:0002546,1.32e-09,4;UBERON:0000965,1.32e-09,4;UBERON:0001803,1.32e-09,4;UBERON:0003073,1.32e-09,4;UBERON:0005426,1.32e-09,4;UBERON:0002530,1.55e-09,59;UBERON:0002046,5.35e-08,5;UBERON:0004117,5.35e-08,5;UBERON:0007689,5.35e-08,5;UBERON:0007123,5.35e-08,5;UBERON:0003091,5.35e-08,5;UBERON:0005911,5.36e-07,82 | |||
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|short_description=p@chr20:50245629..50245639,- | |short_description=p@chr20:50245629..50245639,- | ||
}} | }} |
Latest revision as of 15:21, 28 July 2015
Short description: | p@chr20:50245629..50245639, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:50245629..50245639, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 7.06e-34 | 1 |
hepatocyte | 2.32e-25 | 12 |
crystallin accumulating cell | 1.32e-09 | 4 |
vertebrate lens cell | 1.32e-09 | 4 |
lens epithelial cell | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 2.39e-16 | 19 |
digestive gland | 2.39e-16 | 19 |
liver bud | 2.39e-16 | 19 |
endocrine gland | 1.13e-15 | 35 |
hepatic diverticulum | 3.13e-14 | 22 |
liver primordium | 3.13e-14 | 22 |
digestive tract diverticulum | 1.20e-13 | 23 |
epithelial sac | 1.28e-12 | 25 |
epithelium of foregut-midgut junction | 1.28e-12 | 25 |
anatomical boundary | 1.28e-12 | 25 |
hepatobiliary system | 1.28e-12 | 25 |
foregut-midgut junction | 1.28e-12 | 25 |
septum transversum | 1.28e-12 | 25 |
endocrine system | 2.51e-12 | 45 |
sac | 3.64e-12 | 26 |
gut epithelium | 2.28e-10 | 54 |
exocrine gland | 2.52e-10 | 31 |
exocrine system | 2.52e-10 | 31 |
cuboidal epithelium | 1.32e-09 | 4 |
transparent eye structure | 1.32e-09 | 4 |
simple cuboidal epithelium | 1.32e-09 | 4 |
cranial placode | 1.32e-09 | 4 |
lens of camera-type eye | 1.32e-09 | 4 |
epithelium of lens | 1.32e-09 | 4 |
lens placode | 1.32e-09 | 4 |
lens vesicle | 1.32e-09 | 4 |
gland | 1.55e-09 | 59 |
thyroid gland | 5.35e-08 | 5 |
pharyngeal pouch | 5.35e-08 | 5 |
thyroid diverticulum | 5.35e-08 | 5 |
pharyngeal pouch 2 | 5.35e-08 | 5 |
thyroid primordium | 5.35e-08 | 5 |
endo-epithelium | 5.36e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 7.06e-34 | 1 |
meningioma | 7.06e-34 | 1 |
disease of anatomical entity | 3.95e-14 | 39 |