FFCP PHASE1:Hg19::chr20:47669707..47669711,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:47669707..47669711,+ | |||
|description=CAGE_peak_at_chr20:47669707..47669711,+ | |description=CAGE_peak_at_chr20:47669707..47669711,+ | ||
|id=chr20:47669707..47669711,+ | |id=chr20:47669707..47669711,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000322;7.34e-07;3 | |ontology_enrichment_celltype_v019=CL:0000322;7.34e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000322,4.86e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.92e-07;3!UBERON:0006241;7.34e-07;3!UBERON:0006215;7.34e-07;3!UBERON:0003057;7.34e-07;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.92e-07;3!UBERON:0006241;7.34e-07;3!UBERON:0006215;7.34e-07;3!UBERON:0003057;7.34e-07;3 | ||
|ontology_enrichment_disease_v019=DOID:1325;1.31e-10;7!DOID:3904;1.31e-10;7!DOID:3910;6.90e-10;2!DOID:0060058;1.78e-07;10 | |ontology_enrichment_disease_v019=DOID:1325;1.31e-10;7!DOID:3904;1.31e-10;7!DOID:3910;6.90e-10;2!DOID:0060058;1.78e-07;10 | ||
|ontology_enrichment_disease_v019_2=DOID:1325,1.36e-10,7;DOID:3904,1.36e-10,7;DOID:3910,3.68e-10,2;DOID:0060058,1.94e-07,10;DOID:162,5.05e-07,235;DOID:14566,9.20e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.13e-07!82;UBERON:0001049!9.97e-07!57;UBERON:0005068!9.97e-07!57;UBERON:0006241!9.97e-07!57;UBERON:0007135!9.97e-07!57 | |ontology_enrichment_uberon=UBERON:0001017!7.13e-07!82;UBERON:0001049!9.97e-07!57;UBERON:0005068!9.97e-07!57;UBERON:0006241!9.97e-07!57;UBERON:0007135!9.97e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;6.90e-10;2!UBERON:0002173;6.90e-10;2!UBERON:0002186;6.90e-10;2!UBERON:0002240;7.34e-07;3!UBERON:0004821;7.34e-07;3!UBERON:0007499;7.34e-07;3!UBERON:0005174;7.34e-07;3!UBERON:0003215;7.34e-07;3!UBERON:0010368;7.34e-07;3!UBERON:0009911;7.34e-07;3!UBERON:0002299;7.34e-07;3!UBERON:0006524;7.34e-07;3!UBERON:0008874;7.34e-07;3!UBERON:0001137;7.34e-07;3!UBERON:0002169;7.34e-07;3!UBERON:0004894;7.34e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0004903;6.90e-10;2!UBERON:0002173;6.90e-10;2!UBERON:0002186;6.90e-10;2!UBERON:0002240;7.34e-07;3!UBERON:0004821;7.34e-07;3!UBERON:0007499;7.34e-07;3!UBERON:0005174;7.34e-07;3!UBERON:0003215;7.34e-07;3!UBERON:0010368;7.34e-07;3!UBERON:0009911;7.34e-07;3!UBERON:0002299;7.34e-07;3!UBERON:0006524;7.34e-07;3!UBERON:0008874;7.34e-07;3!UBERON:0001137;7.34e-07;3!UBERON:0002169;7.34e-07;3!UBERON:0004894;7.34e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.68e-10,2;UBERON:0002173,3.68e-10,2;UBERON:0002186,3.68e-10,2;UBERON:0004821,4.86e-07,3;UBERON:0003215,4.86e-07,3;UBERON:0010368,4.86e-07,3;UBERON:0009911,4.86e-07,3;UBERON:0002299,4.86e-07,3;UBERON:0006524,4.86e-07,3;UBERON:0008874,4.86e-07,3;UBERON:0002169,4.86e-07,3;UBERON:0004894,4.86e-07,3;UBERON:0002240,7.17e-07,3;UBERON:0005174,7.17e-07,3;UBERON:0001137,7.17e-07,3 | |||
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| ||
|short_description=p@chr20:47669707..47669711,+ | |short_description=p@chr20:47669707..47669711,+ | ||
}} | }} |
Latest revision as of 14:56, 28 July 2015
Short description: | p@chr20:47669707..47669711, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:47669707..47669711, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 4.86e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.68e-10 | 2 |
alveolar duct | 3.68e-10 | 2 |
bronchiole | 3.68e-10 | 2 |
pulmonary alveolus epithelium | 4.86e-07 | 3 |
alveolus | 4.86e-07 | 3 |
pulmonary lobule | 4.86e-07 | 3 |
lobule | 4.86e-07 | 3 |
alveolus of lung | 4.86e-07 | 3 |
alveolar system | 4.86e-07 | 3 |
pulmonary acinus | 4.86e-07 | 3 |
alveolar sac | 4.86e-07 | 3 |
alveolar wall | 4.86e-07 | 3 |
spinal cord | 7.17e-07 | 3 |
dorsal region element | 7.17e-07 | 3 |
dorsum | 7.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 1.36e-10 | 7 |
bronchogenic carcinoma | 1.36e-10 | 7 |
lung adenocarcinoma | 3.68e-10 | 2 |
lymphoma | 1.94e-07 | 10 |
cancer | 5.05e-07 | 235 |
disease of cellular proliferation | 9.20e-07 | 239 |