FFCP PHASE1:Hg19::chr20:43324746..43324769,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:43324746..43324769,-
|short_description=p1@ENST00000415889
|description=CAGE_peak_1_at_ENST00000415889_5end
|association_with_transcript=-9bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000415889_5end | |||
|cluster_id=chr20:43324746..43324769,- | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_1_at_ENST00000415889_5end | |||
|id=chr20:43324746..43324769,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;2.35e-12;6!CL:0000098;2.35e-12;6!CL:0002167;2.35e-12;6!CL:0002602;1.44e-09;2!CL:0000153;1.59e-07;9!CL:0000447;1.59e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,2.49e-12,6;CL:0000098,2.49e-12,6;CL:0002167,2.49e-12,6;CL:0002602,1.72e-09,2;CL:0000153,1.59e-07,9;CL:0000447,1.59e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.44e-12;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.57e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.70e-13!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.48e-28;9!UBERON:0001557;3.48e-28;9!UBERON:0004905;1.87e-18;8!UBERON:0000982;1.87e-18;8!UBERON:0004770;1.87e-18;8!UBERON:0011135;7.61e-14;5!UBERON:0002216;7.61e-14;5!UBERON:0011134;7.61e-14;5!UBERON:0002209;7.61e-14;5!UBERON:0002213;7.61e-14;5!UBERON:0007844;7.61e-14;5!UBERON:0011138;7.61e-14;5!UBERON:0001130;7.61e-14;5!UBERON:0001066;7.61e-14;5!UBERON:0001468;7.61e-14;5!UBERON:0006444;1.44e-09;2!UBERON:0001995;1.44e-09;2!UBERON:0004715;1.44e-09;2!UBERON:0000072;5.95e-09;37!UBERON:0000966;2.52e-08;5!UBERON:0005388;2.52e-08;5!UBERON:0001802;2.52e-08;5!UBERON:0000065;1.08e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.51e-28,9;UBERON:0004905,1.42e-18,8;UBERON:0000982,1.42e-18,8;UBERON:0004770,1.42e-18,8;UBERON:0011135,8.58e-14,5;UBERON:0002216,8.58e-14,5;UBERON:0011134,8.58e-14,5;UBERON:0002209,8.58e-14,5;UBERON:0002213,8.58e-14,5;UBERON:0005856,8.58e-14,5;UBERON:0005866,8.58e-14,5;UBERON:0005863,8.58e-14,5;UBERON:0007844,8.58e-14,5;UBERON:0011138,8.58e-14,5;UBERON:0001130,8.58e-14,5;UBERON:0001066,8.58e-14,5;UBERON:0001468,8.58e-14,5;UBERON:0001557,9.36e-13,19;UBERON:0006444,1.72e-09,2;UBERON:0001995,1.72e-09,2;UBERON:0004715,1.72e-09,2;UBERON:0008947,3.64e-09,38;UBERON:0003258,3.64e-09,38;UBERON:0000072,4.62e-07,47;UBERON:0000966,4.84e-07,6;UBERON:0005388,4.84e-07,6;UBERON:0001802,4.84e-07,6 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0,0,0,0,2.47532705920093,2.31978163009541,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00535164254356,1.15877215168659,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,1.24864030732128,0,0.298897361103602,0,0,0,0.408308342509787,0.122834317311768,0.413303124703062,1.18800285728205,0.741800787835671,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0,1.06778694409284,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0.920498986422993,2.10139873864455,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,2.48444280083672,2.36018566109342,0.964044119533928,2.64705534557745,1.30727666455444,2.60997681022206,1.21348177344148,1.37355025587742,1.92373578473195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0672872929785,1.50051156317903,0.271265023699736,7.48695101510906,5.17444067511769,5.51958452618771,7.02848489956279,1.80567659836631,0,0,0,0.184369168541703,1.99832313276591,0.783204629850962,0,0,0,0,0,0,0.30239029332968,0.496215615637554,0,0,0.256278298511402,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,1.64007322849853,2.60302715731442,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0.429680979473094,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,2.74439925886963,1.97576935775941,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.721346064882224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0.102268682502155,0,0.933118762985422,0,0,0,0.887790650732402,0,0,0,0.0927680981618513,0,0,0,0,0,0,2.12748913591143,0,0,0,0,0,0,0,0,0,5.99161549354446,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0,0.522355239482415,0.34945333648406,0,9.48212046633035,8.69762873325608,7.55462204889525,0.581934098930517,0,0.225980740780532,0,0,0,0.195551382734803,0,0.213452994739353,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.687481272035051,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.244052529803926,0,0,0,0,8.02422082630139,0,0.151649117541648,0,0,0,0,1.19403842309499,0.467426619694449,0,1.7046270474758,1.0062716070103,0,0.228840068396924,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78554694685953,2.50405779529494,0,0,0.226705925512272,0.463044948647668,0.734210113519403,0,0,0.219284049578707,0.176689145945881,0,0,0,3.79973375904318,2.12701969324168,0.138258436151731,0,0,0,0,2.94927490504463,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.918736432059601,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0.808679663052368,0.381382095467167,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0.472775363535873,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,21.1738239721854,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,4.03268301363616,0,0,0,0,0,0,0,0,0,0,0,0,39.5785860283545,0,0,0,0,0.735444965261716,0,0,0,0,0.169927114687817,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0.743990036333503,2.77305377178851,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,1.00918676322552,0,0,0,0,0,0.215166616178029,0,0,0.426909383510862,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000415889 | |||
}} | }} |
Latest revision as of 14:14, 28 July 2015
Short description: | p1@ENST00000415889 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000415889_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | -9bp_to_ENST00000415889_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 2.49e-12 | 6 |
sensory epithelial cell | 2.49e-12 | 6 |
olfactory epithelial cell | 2.49e-12 | 6 |
annulus pulposus cell | 1.72e-09 | 2 |
GAG secreting cell | 1.59e-07 | 9 |
carbohydrate secreting cell | 1.59e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.51e-28 | 9 |
articulation | 1.42e-18 | 8 |
skeletal joint | 1.42e-18 | 8 |
articular system | 1.42e-18 | 8 |
intervertebral cartilage | 8.58e-14 | 5 |
symphysis | 8.58e-14 | 5 |
nonsynovial joint | 8.58e-14 | 5 |
fibrous joint | 8.58e-14 | 5 |
cartilaginous joint | 8.58e-14 | 5 |
developing mesenchymal condensation | 8.58e-14 | 5 |
pre-cartilage condensation | 8.58e-14 | 5 |
cartilaginous condensation | 8.58e-14 | 5 |
cartilage element | 8.58e-14 | 5 |
post-cranial axial skeletal system | 8.58e-14 | 5 |
vertebral column | 8.58e-14 | 5 |
intervertebral disk | 8.58e-14 | 5 |
intervertebral joint | 8.58e-14 | 5 |
upper respiratory tract | 9.36e-13 | 19 |
annulus fibrosus | 1.72e-09 | 2 |
fibrocartilage | 1.72e-09 | 2 |
annulus fibrosus disci intervertebralis | 1.72e-09 | 2 |
respiratory primordium | 3.64e-09 | 38 |
endoderm of foregut | 3.64e-09 | 38 |
segment of respiratory tract | 4.62e-07 | 47 |
retina | 4.84e-07 | 6 |
photoreceptor array | 4.84e-07 | 6 |
posterior segment of eyeball | 4.84e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.57e-07 | 106 |