FFCP PHASE1:Hg19::chr20:308197..308199,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:308197..308199,+ | |||
|description=CAGE_peak_at_chr20:308197..308199,+ | |description=CAGE_peak_at_chr20:308197..308199,+ | ||
|id=chr20:308197..308199,+ | |id=chr20:308197..308199,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000135;4.44e-12;3!CL:0000346;4.44e-12;3!CL:1000428;4.44e-12;3!CL:0000388;4.44e-12;3!CL:0002379;1.10e-09;1!CL:0002559;1.36e-07;5!CL:0002188;1.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.40e-12,3;CL:0000388,2.40e-12,3;CL:0000346,2.85e-12,3;CL:1000428,2.85e-12,3;CL:0002379,1.62e-09,1;CL:0002559,1.04e-07,5;CL:0002188,1.46e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;1.10e-09;1!DOID:3565;1.10e-09;1!DOID:3112;1.10e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.62e-09,1;DOID:3565,1.62e-09,1;DOID:3112,1.91e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.44e-12;3!UBERON:0000043;4.44e-12;3!UBERON:0007845;4.44e-12;3!UBERON:0000412;4.44e-12;3!UBERON:0001992;4.44e-12;3!UBERON:0002067;6.75e-09;9!UBERON:0002073;1.36e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.40e-12,3;UBERON:0000043,2.40e-12,3;UBERON:0007845,2.40e-12,3;UBERON:0000412,2.85e-12,3;UBERON:0001992,2.85e-12,3;UBERON:0002067,6.68e-09,9;UBERON:0004016,6.68e-09,9;UBERON:0010083,6.68e-09,9;UBERON:0002073,1.04e-07,5;UBERON:0005086,1.04e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0,0,0,0,0.136874425072884,0.251085279189606,0.229240217243854,0.0821005894499457,0.314843125254717,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0.579386075843295,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.825354125820202,0,0,0,0,1.20848795132744,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0.312160076830321,1.1409436430889,0.298897361103602,0.23486899728753,0.485618833104395,0.280901613404497,0.204154171254893,0.122834317311768,0.103325781175765,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0.625592599359821,0,0.438977620880838,0.919463387397059,0.45071417671979,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0,0.412210116953756,0,0.18611685633159,0.168776332241266,0.389748020644795,0,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0.265059536642971,0.348581828608555,0.310983165046111,0,0,0,1.28648187638577,1.38134921352481,0.928735856063958,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0,0,0,0,0,0,0,0.205654985406647,1.20137223137567,0,0.112131084345361,0,0,0,0,0.845302752556,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0.508189248444927,0,0,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,2.3195768543631,0.473107245101804,0.234282829985426,0,0,0,0,0,0.173767228936166,0.587403472388222,0,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0.120859449591622,1.20303882181971,0.460404944679482,0,0.364182336013434,0.393373244878272,0,0,0,0,0,1.13733384070897,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.307007349452259,0,0.214840489736547,0.725083469571143,0.170453254832202,0.178064071293475,0.165284915360978,0.192190067365106,0.127612712494584,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,1.56989728039846,0,0,0.235624804691373,0,0,0.842516912477962,0,0,0,0,0.565621727814851,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,0.75894634753143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0.159426272728822,0,0,0.635020748171649,0.324621940274555,0.561594356226918,0,0.156679895773023,0,0,0,0.403599414382095,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0,0.251932747854276,0.102268682502155,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,0.227586896570999,0,0.472775363535873,0,0.291604613383254,0.520874984799877,0,0.241192877250816,0,0.110579259931225,0,0,0,0.139423744278603,0.153900517007594,0,0,0.179515288819544,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0.432777279484182,0,0,0,0,0,0,0,0,0,0.729819156862664,0.19566461893209,0,0.394584402849391,0,0.91821828489147,0,0,0.207376382794494,0,0,0,0,0,0.554698692052555,0,0,0,0.34945333648406,0.171986032471617,0.387025325156341,0.219267951258557,0.410577285266046,0.0969890164884194,0,0,0,0,0,0,0,0,1.19885765749278,0,0.114536596165916,0.343189995723929,0,0,0,0,0.104602846312333,0.203996435272644,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,1.26053091691558,2.06039645952916,0.943649613958588,0.0984274815147488,0.0846733320657845,0,0.544813624446302,0.803765742325096,0.825236619583403,0.415440338029185,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0,0,0.339936274560377,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0.4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| ||
|short_description=p@chr20:308197..308199,+ | |short_description=p@chr20:308197..308199,+ | ||
}} | }} |
Latest revision as of 12:58, 28 July 2015
Short description: | p@chr20:308197..308199, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:308197..308199, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.40e-12 | 3 |
tendon cell | 2.40e-12 | 3 |
hair follicle dermal papilla cell | 2.85e-12 | 3 |
stem cell of epidermis | 2.85e-12 | 3 |
meningothelial cell | 1.62e-09 | 1 |
hair follicle cell | 1.04e-07 | 5 |
glomerular endothelial cell | 1.46e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.40e-12 | 3 |
tendon | 2.40e-12 | 3 |
regular connective tissue | 2.40e-12 | 3 |
dermal papilla | 2.85e-12 | 3 |
papillary layer of dermis | 2.85e-12 | 3 |
dermis | 6.68e-09 | 9 |
dermatome | 6.68e-09 | 9 |
future dermis | 6.68e-09 | 9 |
hair follicle | 1.04e-07 | 5 |
hair follicle placode | 1.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.62e-09 | 1 |
meningioma | 1.62e-09 | 1 |
papillary adenocarcinoma | 1.91e-09 | 1 |