FFCP PHASE1:Hg19::chr20:19984251..19984258,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:19984251..19984258,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr20:19984251..19984258,+ | |description=CAGE_peak_at_chr20:19984251..19984258,+ | ||
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|ontology_enrichment_celltype=CL:0002057!5.07e-19!42;CL:0002009!9.51e-18!65;CL:0000860!1.24e-17!45;CL:0002194!1.06e-16!63;CL:0000576!1.06e-16!63;CL:0000040!1.06e-16!63;CL:0000559!1.06e-16!63;CL:0000557!1.55e-15!71;CL:0000839!4.06e-14!70;CL:0000766!2.03e-13!76 | |ontology_enrichment_celltype=CL:0002057!5.07e-19!42;CL:0002009!9.51e-18!65;CL:0000860!1.24e-17!45;CL:0002194!1.06e-16!63;CL:0000576!1.06e-16!63;CL:0000040!1.06e-16!63;CL:0000559!1.06e-16!63;CL:0000557!1.55e-15!71;CL:0000839!4.06e-14!70;CL:0000766!2.03e-13!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.81e-23;33!CL:0002057;5.81e-23;33!CL:0000473;1.43e-20;39!CL:0000234;1.43e-20;39!CL:0000576;2.79e-10;48!CL:0000766;2.63e-08;69!CL:0000174;3.81e-08;3!CL:0000322;7.19e-08;3!CL:0002174;6.06e-07;1!CL:0000501;6.06e-07;1 | |ontology_enrichment_celltype_v019=CL:0000860;5.81e-23;33!CL:0002057;5.81e-23;33!CL:0000473;1.43e-20;39!CL:0000234;1.43e-20;39!CL:0000576;2.79e-10;48!CL:0000766;2.63e-08;69!CL:0000174;3.81e-08;3!CL:0000322;7.19e-08;3!CL:0002174;6.06e-07;1!CL:0000501;6.06e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.54e-26,48;CL:0000234,7.54e-26,48;CL:0000860,9.22e-23,42;CL:0002057,9.22e-23,42;CL:0002194,5.79e-20,59;CL:0000576,5.79e-20,59;CL:0000040,5.79e-20,59;CL:0000559,5.79e-20,59;CL:0002009,3.32e-19,61;CL:0000839,1.66e-17,66;CL:0000557,3.39e-17,67;CL:0000766,8.92e-16,72;CL:0000763,2.03e-09,108;CL:0000049,2.03e-09,108;CL:0002087,1.20e-08,115;CL:0002031,3.76e-08,120;CL:0000174,4.40e-08,3;CL:0000322,1.09e-07,3;CL:0002174,6.08e-07,1;CL:0000501,6.08e-07,1;CL:0000738,8.17e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.68e-16;42 | |ontology_enrichment_development_v019=CL:0002057;5.68e-16;42 | ||
|ontology_enrichment_disease=DOID:0050687!6.99e-10!143;DOID:14566!4.14e-07!239 | |ontology_enrichment_disease=DOID:0050687!6.99e-10!143;DOID:14566!4.14e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3910;2.22e-11;2 | |ontology_enrichment_disease_v019=DOID:3910;2.22e-11;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,4.19e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.70e-12!86;UBERON:0002371!5.96e-12!80;UBERON:0004765!1.27e-09!101;UBERON:0001434!1.27e-09!101;UBERON:0002405!3.38e-08!115;UBERON:0002390!1.75e-07!102;UBERON:0003061!1.75e-07!102;UBERON:0002193!4.30e-07!112 | |ontology_enrichment_uberon=UBERON:0001474!2.70e-12!86;UBERON:0002371!5.96e-12!80;UBERON:0004765!1.27e-09!101;UBERON:0001434!1.27e-09!101;UBERON:0002405!3.38e-08!115;UBERON:0002390!1.75e-07!102;UBERON:0003061!1.75e-07!102;UBERON:0002193!4.30e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.22e-11;2!UBERON:0002173;2.22e-11;2!UBERON:0002186;2.22e-11;2!UBERON:0004821;7.19e-08;3!UBERON:0007499;7.19e-08;3!UBERON:0003215;7.19e-08;3!UBERON:0010368;7.19e-08;3!UBERON:0009911;7.19e-08;3!UBERON:0002299;7.19e-08;3!UBERON:0006524;7.19e-08;3!UBERON:0008874;7.19e-08;3!UBERON:0002169;7.19e-08;3!UBERON:0004894;7.19e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0004903;2.22e-11;2!UBERON:0002173;2.22e-11;2!UBERON:0002186;2.22e-11;2!UBERON:0004821;7.19e-08;3!UBERON:0007499;7.19e-08;3!UBERON:0003215;7.19e-08;3!UBERON:0010368;7.19e-08;3!UBERON:0009911;7.19e-08;3!UBERON:0002299;7.19e-08;3!UBERON:0006524;7.19e-08;3!UBERON:0008874;7.19e-08;3!UBERON:0002169;7.19e-08;3!UBERON:0004894;7.19e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.73e-15,82;UBERON:0002371,8.98e-15,76;UBERON:0004765,1.29e-13,90;UBERON:0001434,6.71e-12,100;UBERON:0002405,1.81e-11,93;UBERON:0004903,4.19e-11,2;UBERON:0002173,4.19e-11,2;UBERON:0002186,4.19e-11,2;UBERON:0002390,1.02e-10,98;UBERON:0003061,1.02e-10,98;UBERON:0002193,2.03e-09,108;UBERON:0004821,1.09e-07,3;UBERON:0003215,1.09e-07,3;UBERON:0010368,1.09e-07,3;UBERON:0009911,1.09e-07,3;UBERON:0002299,1.09e-07,3;UBERON:0006524,1.09e-07,3;UBERON:0008874,1.09e-07,3;UBERON:0002169,1.09e-07,3;UBERON:0004894,1.09e-07,3;UBERON:0002204,1.57e-07,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,1.80808358407193,0,1.46379839637152,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0.383829398097213,0,0,0.30120591877825,0,0,0,0,0,1.60435557976113,0.651032612147555,0.223915474239924,0.647787332037959,0.257575567634187,0.436194716338694,0.377875943688809,0.485168122375632,2.78914844286822,0.411167888021826,0.309706370895104,1.1507695692886,0,0.709446689665756,2.75796544589295,1.93645405075148,0,0.752969358170419,0.272906150057846,0,4.89734227793444,1.92557416245656,5.75403413219137,0.329851300186716,0.997318288108159,0.426224750532694,8.12585868160035,2.8369261234557,5.60540024096017,0.75374599577023,0.521482918420201,0.217188844705117,12.1079900526674,2.57794345191295,5.06339819905415,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0.213557388818567,0,0.300091096084402,0.103052529238439,0.515281080091258,0,0.337552664482532,0,0.504867548488229,0.276149695926898,0.323292113637624,0,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,0,0,0.099972991182057,0,1.50677127429638,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0.256686072559497,0.254094624222463,1.30139853857622,0.773288812777695,0,1.27587750330633,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0.184161977871793,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0.462145851343933,0,0.137836572484531,0,0.145016693914229,0,0.356128142586949,0,0.384380134730212,0.382838137483752,0,0,0.94443704049192,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.539617372749944,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0.329294892959902,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0.18714054040822,0,0,0,1.42068073403207,0.47748896947538,0,0,0,0.140669416410513,1.55832187032068,0,1.47787785689595,0.398495976502139,0,0.251932747854276,0.20453736500431,0,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.910347586283997,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.46112780877612,0.359030577639089,0.325942115766024,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0.424059214301822,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.189559738885464,0.150323419414493,0,0,0.661983911750998,0.941798755221676,0,0,0.416024019039416,0.173559738335131,0.685946781900644,0.609414446062818,0,1.37588825977293,0,0.0730893170861856,0,0,0,0,0.411125773940253,0,0.0633107959558787,0,0.480952921509202,0,0,0,0,0,0,0.49701014226173,0.235694034616795,0.407712618220842,0,0.305994652908965,0.577901179803038,0,0.273810757783986,0,3.43812353135966,0,0,0,0,0,0,0,0.134366944973453,0.720599767084807,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0.2249738915515,0.77380195455795,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0.864221491201268,0.326587360109409,1.19730191562487,0,0.170388021785422,0.226624183040251,0,0,0.129282956361551,0,0.684347351537318,0.704815022316672,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0.138348634936231,0.624902039810533,0,0,1.17632909849086,0,0.144921028610825,0.298509605773748,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0,0.380805212168795,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,1.60011105865261,0,0,0,0.192619830407303,1.28664954824955,0,0,0,0.489473409012935,0.179088841081487,0,0.438568099157414,0,0.192914038270915,0.675769762612291,0.256241518587947,0.690860683462397,0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| ||
|short_description=p@chr20:19984251..19984258,+ | |short_description=p@chr20:19984251..19984258,+ | ||
}} | }} |
Latest revision as of 12:19, 28 July 2015
Short description: | p@chr20:19984251..19984258, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:19984251..19984258, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.54e-26 | 48 |
phagocyte | 7.54e-26 | 48 |
classical monocyte | 9.22e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.22e-23 | 42 |
monopoietic cell | 5.79e-20 | 59 |
monocyte | 5.79e-20 | 59 |
monoblast | 5.79e-20 | 59 |
promonocyte | 5.79e-20 | 59 |
macrophage dendritic cell progenitor | 3.32e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.66e-17 | 66 |
granulocyte monocyte progenitor cell | 3.39e-17 | 67 |
myeloid leukocyte | 8.92e-16 | 72 |
myeloid cell | 2.03e-09 | 108 |
common myeloid progenitor | 2.03e-09 | 108 |
nongranular leukocyte | 1.20e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.76e-08 | 120 |
steroid hormone secreting cell | 4.40e-08 | 3 |
pneumocyte | 1.09e-07 | 3 |
follicular cell of ovary | 6.08e-07 | 1 |
granulosa cell | 6.08e-07 | 1 |
leukocyte | 8.17e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.73e-15 | 82 |
bone marrow | 8.98e-15 | 76 |
skeletal element | 1.29e-13 | 90 |
skeletal system | 6.71e-12 | 100 |
immune system | 1.81e-11 | 93 |
bronchoalveolar duct junction | 4.19e-11 | 2 |
alveolar duct | 4.19e-11 | 2 |
bronchiole | 4.19e-11 | 2 |
hematopoietic system | 1.02e-10 | 98 |
blood island | 1.02e-10 | 98 |
hemolymphoid system | 2.03e-09 | 108 |
pulmonary alveolus epithelium | 1.09e-07 | 3 |
alveolus | 1.09e-07 | 3 |
pulmonary lobule | 1.09e-07 | 3 |
lobule | 1.09e-07 | 3 |
alveolus of lung | 1.09e-07 | 3 |
alveolar system | 1.09e-07 | 3 |
pulmonary acinus | 1.09e-07 | 3 |
alveolar sac | 1.09e-07 | 3 |
alveolar wall | 1.09e-07 | 3 |
musculoskeletal system | 1.57e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.19e-11 | 2 |