FFCP PHASE1:Hg19::chr1:95332264..95332266,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:95332264..95332266,+ | |||
|coexpression_cluster_id=C372 | |coexpression_cluster_id=C372 | ||
|description=CAGE_peak_at_chr1:95332264..95332266,+ | |description=CAGE_peak_at_chr1:95332264..95332266,+ | ||
|id=chr1:95332264..95332266,+ | |id=chr1:95332264..95332266,+ | ||
|ontology_enrichment_celltype=CL:0000128!2.73e-19!7;CL:0000126!2.73e-19!7;CL:0000127!2.73e-19!7;CL:0002453!2.73e-19!7;CL:0002603!7.50e-17!3;CL:0002605!2.84e-08!3;CL:0000243!8.24e-08!15;CL:0000125!8.24e-08!15;CL:0000030!8.24e-08!15;CL:0000339!8.24e-08!15;CL:0000064!8.33e-08!3;CL:0005012!8.33e-08!3;CL:0000067!8.33e-08!3;CL:0002304!8.33e-08!3;CL:0000095!5.83e-07!17;CL:0000123!5.83e-07!17;CL:0002319!9.79e-07!25 | |ontology_enrichment_celltype=CL:0000128!2.73e-19!7;CL:0000126!2.73e-19!7;CL:0000127!2.73e-19!7;CL:0002453!2.73e-19!7;CL:0002603!7.50e-17!3;CL:0002605!2.84e-08!3;CL:0000243!8.24e-08!15;CL:0000125!8.24e-08!15;CL:0000030!8.24e-08!15;CL:0000339!8.24e-08!15;CL:0000064!8.33e-08!3;CL:0005012!8.33e-08!3;CL:0000067!8.33e-08!3;CL:0002304!8.33e-08!3;CL:0000095!5.83e-07!17;CL:0000123!5.83e-07!17;CL:0002319!9.79e-07!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.27e-34;3!UBERON:0003057;4.27e-34;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002240;4.27e-34;3!UBERON:0005174;4.27e-34;3!UBERON:0001137;4.27e-34;3!UBERON:0001896;5.96e-34;3!UBERON:0005290;5.96e-34;3!UBERON:0002298;9.07e-18;6!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
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|short_description=p@chr1:95332264..95332266,+ | |short_description=p@chr1:95332264..95332266,+ | ||
}} | }} |
Latest revision as of 11:34, 28 July 2015
Short description: | p@chr1:95332264..95332266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:95332264..95332266, + |
Coexpression cluster: | C372_spinal_medulla_substantia_locus_thalamus_corpus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.27e-34 | 3 |
dorsal region element | 4.27e-34 | 3 |
dorsum | 4.27e-34 | 3 |
medulla oblongata | 5.96e-34 | 3 |
myelencephalon | 5.96e-34 | 3 |
future myelencephalon | 5.96e-34 | 3 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
brainstem | 9.07e-18 | 6 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |