FFCP PHASE1:Hg19::chr1:94616186..94616198,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:94616186..94616198,- to FFCP PHASE1:Hg19::chr1:94616186..94616198,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:94616186..94616198,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr1:94616186..94616198,- | |||
|id=chr1:94616186..94616198,- | |||
|ontology_enrichment_celltype=CL:0002149!3.70e-10!6;CL:0002255!3.70e-10!6;CL:0000066!1.04e-08!254;CL:0000159!2.92e-08!2;CL:1000415!2.92e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002149;6.50e-13;6!CL:0002255;6.50e-13;6!CL:1000415;2.72e-10;2!CL:0002592;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,6.12e-13,6;CL:0002255,6.12e-13,6;CL:1000415,2.49e-10,2;CL:0002592,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.99e-07;3!UBERON:0003353;1.99e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.76e-38!143;DOID:14566!3.82e-27!239;DOID:162!1.28e-26!235;DOID:305!5.37e-25!106;DOID:299!1.32e-17!25;DOID:3001!3.70e-10!6;DOID:201!2.21e-09!6;DOID:0060100!2.21e-09!6;DOID:4468!1.65e-08!2;DOID:0050686!2.16e-08!137;DOID:7!4.45e-08!39;DOID:4231!9.88e-08!2;DOID:1907!9.88e-08!2;DOID:1115!1.82e-07!20;DOID:120!2.70e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:3347;1.56e-19;1!DOID:3001;6.50e-13;6!DOID:4468;1.64e-10;2!DOID:299;4.09e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.56e-19,1;DOID:3001,6.12e-13,6;DOID:4468,1.72e-10,2;DOID:305,4.80e-08,106;DOID:299,4.05e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0002075!3.28e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.25e-19;1!UBERON:0002110;2.79e-07;3!UBERON:0003498;2.79e-07;3!UBERON:0005985;2.79e-07;3!UBERON:0001621;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.62e-19,1;UBERON:0001621,2.47e-07,3;UBERON:0002110,2.63e-07,3;UBERON:0006242,2.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,1.22439575525196,0,13.9342769364476,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0.174919999992391,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,0.816164040795739,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,1.13843818411917,0.832048038078832,0.867798691675654,0,0.174118413160805,0,0.171986032471617,0,0,0,0,0.176512253383001,0,0.548167698587004,0,0,1.36885967914362,0.400794101257669,0,0,0,0,0,0,0,0,0.543616824294456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0.633936370075881,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,2.7614397042404,0,0,0.60511520611056,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.472775363535873,3.44817345865414,0,0,0.840816489941367,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0,0,1.60374807980835,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,1.58510321173008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,1.22439575525196,0,13.9342769364476,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,1.11136990144637,0,0,0,0,0.174919999992391,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,3.37596903244843,0.816164040795739,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,1.13843818411917,0.832048038078832,0.867798691675654,0,0.174118413160805,0,0.171986032471617,0,0,0,0,0.176512253383001,0,0.548167698587004,0,0,1.36885967914362,0.400794101257669,0,0,0,0,0,0,0,0,0.543616824294456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0.633936370075881,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0.115525666150338,0,2.7614397042404,0,0,0.60511520611056,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0.472775363535873,3.44817345865414,0,0,0.840816489941367,0,0.215927591218621,0,0,0,0.23248285073625,0,0,0,0,0,0,0.118332000730565,0,0,1.60374807980835,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr1:94616186..94616198,- | |||
}} | }} |
Latest revision as of 11:30, 28 July 2015
Short description: | p@chr1:94616186..94616198, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94616186..94616198, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 6.12e-13 | 6 |
stromal cell of endometrium | 6.12e-13 | 6 |
epithelial cell of gall bladder | 2.49e-10 | 2 |
smooth muscle cell of the coronary artery | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.62e-19 | 1 |
coronary artery | 2.47e-07 | 3 |
gallbladder | 2.63e-07 | 3 |
gall bladder primordium | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.56e-19 | 1 |
female reproductive endometrioid cancer | 6.12e-13 | 6 |
clear cell adenocarcinoma | 1.72e-10 | 2 |
carcinoma | 4.80e-08 | 106 |
adenocarcinoma | 4.05e-07 | 25 |