FFCP PHASE1:Hg19::chr1:94520731..94520759,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:94520731..94520759,- | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_at_chr1:94520731..94520759,- | |description=CAGE_peak_at_chr1:94520731..94520759,- | ||
|id=chr1:94520731..94520759,- | |id=chr1:94520731..94520759,- | ||
|ontology_enrichment_celltype=CL:0002149!9.26e-08!6;CL:0002255!9.26e-08!6 | |ontology_enrichment_celltype=CL:0002149!9.26e-08!6;CL:0002255!9.26e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.32e-09;6!CL:0002255;1.32e-09;6!CL:0000039;2.26e-08;7!CL:0000586;2.26e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.32e-09,6;CL:0002255,1.32e-09,6;CL:0000039,2.35e-08,7;CL:0000586,2.35e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.32e-26;2 | |||
|ontology_enrichment_disease=DOID:3371!3.28e-11!1;DOID:4549!3.28e-11!1;DOID:5861!3.28e-11!1;DOID:6496!3.28e-11!1;DOID:3001!9.26e-08!6 | |ontology_enrichment_disease=DOID:3371!3.28e-11!1;DOID:4549!3.28e-11!1;DOID:5861!3.28e-11!1;DOID:6496!3.28e-11!1;DOID:3001!9.26e-08!6 | ||
|ontology_enrichment_disease_v019=DOID:3001;1.32e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.32e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0003135!9.74e-23!11;UBERON:0006947!9.39e-15!3;UBERON:0004054!9.39e-15!3;UBERON:0001301!8.62e-12!1;UBERON:0000473!1.04e-11!8;UBERON:0001000!1.31e-11!1;UBERON:0005352!1.31e-11!1;UBERON:0002134!1.45e-11!1;UBERON:0005208!1.45e-11!1;UBERON:0005946!1.45e-11!1;UBERON:0005965!1.45e-11!1;UBERON:0002078!1.45e-11!1;UBERON:0003101!2.45e-11!22;UBERON:0000079!2.45e-11!22;UBERON:0005904!2.68e-11!4;UBERON:0002581!6.00e-11!1;UBERON:0003133!1.27e-09!48;UBERON:0005156!1.08e-07!59;UBERON:0000990!1.08e-07!59;UBERON:0004175!8.85e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.46e-50;1!UBERON:0003135;4.91e-19;11!UBERON:0006947;6.76e-18;3!UBERON:0004054;6.76e-18;3!UBERON:0005904;8.82e-14;4!UBERON:0004175;1.53e-10;21!UBERON:0003101;4.43e-10;22!UBERON:0000079;4.43e-10;22!UBERON:0000473;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,1.46e-50,1;UBERON:0003135,5.14e-19,11;UBERON:0006947,6.76e-18,3;UBERON:0004054,6.76e-18,3;UBERON:0005904,8.82e-14,4;UBERON:0003133,3.42e-10,48;UBERON:0003101,4.53e-10,22;UBERON:0000079,4.53e-10,22;UBERON:0004175,5.06e-09,25;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59;UBERON:0005103,1.49e-07,8;UBERON:0000083,1.49e-07,8;UBERON:0009201,1.49e-07,8;UBERON:0006553,1.49e-07,8;UBERON:0003074,1.49e-07,8;UBERON:0003060,1.49e-07,8;UBERON:0000473,1.80e-07,8;UBERON:0000080,7.48e-07,9;UBERON:0002120,7.48e-07,9;UBERON:0004875,7.48e-07,9;UBERON:0005721,7.48e-07,9;UBERON:0005754,7.48e-07,9;UBERON:0007297,7.48e-07,9 | |||
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|short_description=p@chr1:94520731..94520759,- | |short_description=p@chr1:94520731..94520759,- | ||
}} | }} |
Latest revision as of 11:29, 28 July 2015
Short description: | p@chr1:94520731..94520759, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:94520731..94520759, - |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.32e-09 | 6 |
stromal cell of endometrium | 1.32e-09 | 6 |
germ line cell | 2.35e-08 | 7 |
germ cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
epididymis | 1.46e-50 | 1 |
male reproductive organ | 5.14e-19 | 11 |
male genital duct | 6.76e-18 | 3 |
internal male genitalia | 6.76e-18 | 3 |
duct of male reproductive system | 8.82e-14 | 4 |
reproductive organ | 3.42e-10 | 48 |
male organism | 4.53e-10 | 22 |
male reproductive system | 4.53e-10 | 22 |
internal genitalia | 5.06e-09 | 25 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
mesonephric epithelium | 1.49e-07 | 8 |
mesonephric tubule | 1.49e-07 | 8 |
nephric duct | 1.49e-07 | 8 |
renal duct | 1.49e-07 | 8 |
mesonephric duct | 1.49e-07 | 8 |
pronephric duct | 1.49e-07 | 8 |
testis | 1.80e-07 | 8 |
mesonephros | 7.48e-07 | 9 |
pronephros | 7.48e-07 | 9 |
nephrogenic cord | 7.48e-07 | 9 |
pronephric mesoderm | 7.48e-07 | 9 |
rostral part of nephrogenic cord | 7.48e-07 | 9 |
presumptive pronephric mesoderm | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.32e-09 | 6 |