FFCP PHASE1:Hg19::chr1:86921028..86921032,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:86921028..86921032,+ | |||
|coexpression_cluster_id=C3932 | |coexpression_cluster_id=C3932 | ||
|description=CAGE_peak_at_chr1:86921028..86921032,+ | |description=CAGE_peak_at_chr1:86921028..86921032,+ | ||
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|ontology_enrichment_celltype=CL:0002076!1.52e-21!43;CL:0002166!2.07e-17!3;CL:0000223!6.84e-15!59;CL:0002251!1.40e-11!21;CL:0002159!1.67e-10!13;CL:0002368!3.68e-10!13;CL:0000066!1.46e-09!254;CL:0000240!8.63e-09!6;CL:0000311!8.63e-09!6;CL:0000079!8.63e-09!6;CL:0000237!8.63e-09!6;CL:0000036!8.63e-09!6;CL:0000357!8.63e-09!6;CL:0000114!8.63e-09!6;CL:0002231!1.44e-08!3;CL:0002621!2.22e-08!3;CL:0002623!7.20e-08!3;CL:0002077!3.89e-07!33;CL:0002336!9.48e-07!1;CL:0002261!9.48e-07!1;CL:0002170!9.48e-07!1 | |ontology_enrichment_celltype=CL:0002076!1.52e-21!43;CL:0002166!2.07e-17!3;CL:0000223!6.84e-15!59;CL:0002251!1.40e-11!21;CL:0002159!1.67e-10!13;CL:0002368!3.68e-10!13;CL:0000066!1.46e-09!254;CL:0000240!8.63e-09!6;CL:0000311!8.63e-09!6;CL:0000079!8.63e-09!6;CL:0000237!8.63e-09!6;CL:0000036!8.63e-09!6;CL:0000357!8.63e-09!6;CL:0000114!8.63e-09!6;CL:0002231!1.44e-08!3;CL:0002621!2.22e-08!3;CL:0002623!7.20e-08!3;CL:0002077!3.89e-07!33;CL:0002336!9.48e-07!1;CL:0002261!9.48e-07!1;CL:0002170!9.48e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002617;7.14e-26;2!CL:0002231;6.76e-18;3!CL:0002166;9.45e-18;3 | |ontology_enrichment_celltype_v019=CL:0002617;7.14e-26;2!CL:0002231;6.76e-18;3!CL:0002166;9.45e-18;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002617,9.18e-26,2;CL:0002231,6.76e-18,3;CL:0002166,9.46e-18,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3151!4.33e-07!1;DOID:3149!4.33e-07!1 | |ontology_enrichment_disease=DOID:3151!4.33e-07!1;DOID:3149!4.33e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.99e-50;1!DOID:3149;3.99e-50;1!DOID:3451;7.14e-26;2!DOID:4159;7.14e-26;2!DOID:0060122;7.14e-26;2 | |ontology_enrichment_disease_v019=DOID:3151;3.99e-50;1!DOID:3149;3.99e-50;1!DOID:3451;7.14e-26;2!DOID:4159;7.14e-26;2!DOID:0060122;7.14e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,2.42e-50,1;DOID:3149,2.42e-50,1;DOID:3451,5.56e-26,2;DOID:4159,5.56e-26,2;DOID:0060122,5.56e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0000166!7.38e-19!21;UBERON:0000165!4.52e-17!28;UBERON:0000930!4.52e-17!28;UBERON:0000161!2.32e-16!35;UBERON:0001004!2.87e-13!72;UBERON:0001708!3.47e-13!4;UBERON:0001704!3.47e-13!4;UBERON:0003102!5.69e-11!95;UBERON:0003729!4.20e-10!5;UBERON:0001444!3.31e-09!48;UBERON:0002090!6.11e-09!6;UBERON:0001949!2.22e-08!3;UBERON:0004119!3.92e-08!169;UBERON:0000925!3.92e-08!169;UBERON:0006595!3.92e-08!169;UBERON:0001723!4.56e-08!3;UBERON:0001033!4.56e-08!3;UBERON:0010056!4.56e-08!3;UBERON:0000344!4.04e-07!12;UBERON:0000078!4.81e-07!18 | |ontology_enrichment_uberon=UBERON:0000166!7.38e-19!21;UBERON:0000165!4.52e-17!28;UBERON:0000930!4.52e-17!28;UBERON:0000161!2.32e-16!35;UBERON:0001004!2.87e-13!72;UBERON:0001708!3.47e-13!4;UBERON:0001704!3.47e-13!4;UBERON:0003102!5.69e-11!95;UBERON:0003729!4.20e-10!5;UBERON:0001444!3.31e-09!48;UBERON:0002090!6.11e-09!6;UBERON:0001949!2.22e-08!3;UBERON:0004119!3.92e-08!169;UBERON:0000925!3.92e-08!169;UBERON:0006595!3.92e-08!169;UBERON:0001723!4.56e-08!3;UBERON:0001033!4.56e-08!3;UBERON:0010056!4.56e-08!3;UBERON:0000344!4.04e-07!12;UBERON:0000078!4.81e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;1.13e-13;4!UBERON:0001708;1.13e-13;4!UBERON:0008895;1.13e-13;4!UBERON:0011159;3.26e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0000014;1.13e-13;4!UBERON:0001708;1.13e-13;4!UBERON:0008895;1.13e-13;4!UBERON:0011159;3.26e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.00e-13,4;UBERON:0001708,1.13e-13,4;UBERON:0008895,1.13e-13,4;UBERON:0011159,3.26e-11,5;UBERON:0010188,1.44e-09,6;UBERON:0002539,1.44e-09,6;UBERON:0008816,1.44e-09,6 | |||
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|short_description=p@chr1:86921028..86921032,+ | |short_description=p@chr1:86921028..86921032,+ | ||
}} | }} |
Latest revision as of 10:55, 28 July 2015
Short description: | p@chr1:86921028..86921032, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:86921028..86921032, + |
Coexpression cluster: | C3932_Prostate_Small_Keratinocyte_Mallassezderived_Gingival_Sebocyte_Bronchial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 9.18e-26 | 2 |
epithelial cell of prostate | 6.76e-18 | 3 |
epithelial cell of Malassez | 9.46e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.00e-13 | 4 |
jaw skeleton | 1.13e-13 | 4 |
splanchnocranium | 1.13e-13 | 4 |
primary subdivision of cranial skeletal system | 3.26e-11 | 5 |
protuberance | 1.44e-09 | 6 |
pharyngeal arch | 1.44e-09 | 6 |
embryonic head | 1.44e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.42e-50 | 1 |
keratoacanthoma | 2.42e-50 | 1 |
skin carcinoma | 5.56e-26 | 2 |
skin cancer | 5.56e-26 | 2 |
integumentary system cancer | 5.56e-26 | 2 |