FFCP PHASE1:Hg19::chr1:63788080..63788093,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000418244_5end | |association_with_transcript=13bp_to_ENST00000418244_5end | ||
|cluster_id=chr1:63788080..63788093,- | |||
|coexpression_cluster_id=C1775 | |||
|description=CAGE_peak_2_at_ENST00000418244_5end | |description=CAGE_peak_2_at_ENST00000418244_5end | ||
|id=chr1:63788080..63788093,- | |id=chr1:63788080..63788093,- | ||
|ontology_enrichment_celltype=CL:0000148!4.08e-14!10;CL:0000541!4.08e-14!10;CL:0002322!3.15e-10!5;CL:0000147!2.03e-09!14;CL:0000133!1.01e-08!59;CL:0000333!2.68e-08!41;CL:0000710!2.89e-07!20 | |ontology_enrichment_celltype=CL:0000148!4.08e-14!10;CL:0000541!4.08e-14!10;CL:0002322!3.15e-10!5;CL:0000147!2.03e-09!14;CL:0000133!1.01e-08!59;CL:0000333!2.68e-08!41;CL:0000710!2.89e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0002322;5.90e-39;5!CL:0000148;1.76e-36;10!CL:0000147;7.15e-26;14!CL:0002321;9.64e-25;15!CL:0000039;4.78e-18;7!CL:0000586;4.78e-18;7!CL:0000710;6.72e-18;20!CL:0000075;4.59e-13;27!CL:0000540;1.40e-12;6!CL:0000404;1.40e-12;6!CL:0002567;4.42e-11;3!CL:0002077;1.09e-09;34!CL:0000333;3.62e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.86e-39,5;CL:0000148,1.62e-36,10;CL:0000541,1.62e-36,10;CL:0000147,6.76e-26,14;CL:0000039,5.00e-18,7;CL:0000586,5.00e-18,7;CL:0000710,6.47e-18,20;CL:0000133,4.15e-16,59;CL:0000075,4.46e-13,27;CL:0000333,4.72e-13,41;CL:0000221,6.58e-13,72;CL:0000540,1.29e-12,6;CL:0000031,1.29e-12,6;CL:0000404,1.29e-12,6;CL:0002567,4.66e-11,3;CL:0002077,3.17e-10,34;CL:0000047,1.39e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.07e-12;10!UBERON:0005564;1.07e-12;10!CL:0000031;1.40e-12;6!UBERON:0000358;4.72e-09;1!CL:0000133;2.11e-08;59 | |||
|ontology_enrichment_disease=DOID:0050687!1.68e-16!143;DOID:305!1.59e-15!106;DOID:14566!8.42e-15!239;DOID:162!3.11e-14!235;DOID:0050615!9.89e-09!16;DOID:1324!1.95e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.73e-12;22!DOID:2994;2.73e-12;22!DOID:0050619;3.31e-09;1!DOID:1357;3.31e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.99e-12,22;DOID:2994,2.99e-12,22;DOID:0050619,2.82e-09,1;DOID:1357,2.82e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.06e-16;8!UBERON:0000922;7.88e-13;49!UBERON:0003135;1.48e-11;11!UBERON:0001764;3.31e-09;1!UBERON:0001825;3.31e-09;1!UBERON:0000013;3.62e-07;5!UBERON:0002410;3.62e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.38e-16,8;UBERON:0003135,1.52e-11,11;UBERON:0001764,2.82e-09,1;UBERON:0001825,2.82e-09,1;UBERON:0000013,4.04e-07,5;UBERON:0002410,4.04e-07,5 | |||
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| ||
|short_description=p2@ENST00000418244 | |short_description=p2@ENST00000418244 | ||
}} | }} |
Latest revision as of 09:39, 28 July 2015
Short description: | p2@ENST00000418244 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000418244_5end |
Coexpression cluster: | C1775_neuroblastoma_iPS_testicular_H9_HES3GFP_skeletal_Melanocyte |
Association with transcript: | 13bp_to_ENST00000418244_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.86e-39 | 5 |
melanocyte | 1.62e-36 | 10 |
melanoblast | 1.62e-36 | 10 |
pigment cell | 6.76e-26 | 14 |
germ line cell | 5.00e-18 | 7 |
germ cell | 5.00e-18 | 7 |
neurecto-epithelial cell | 6.47e-18 | 20 |
neurectodermal cell | 4.15e-16 | 59 |
columnar/cuboidal epithelial cell | 4.46e-13 | 27 |
migratory neural crest cell | 4.72e-13 | 41 |
ectodermal cell | 6.58e-13 | 72 |
neuron | 1.29e-12 | 6 |
neuroblast | 1.29e-12 | 6 |
electrically signaling cell | 1.29e-12 | 6 |
light melanocyte | 4.66e-11 | 3 |
ecto-epithelial cell | 3.17e-10 | 34 |
neuronal stem cell | 1.39e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 8.38e-16 | 8 |
male reproductive organ | 1.52e-11 | 11 |
maxillary sinus | 2.82e-09 | 1 |
paranasal sinus | 2.82e-09 | 1 |
sympathetic nervous system | 4.04e-07 | 5 |
autonomic nervous system | 4.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.99e-12 | 22 |
germ cell cancer | 2.99e-12 | 22 |
paranasal sinus cancer | 2.82e-09 | 1 |
maxillary sinus cancer | 2.82e-09 | 1 |