FFCP PHASE1:Hg19::chr1:63153608..63153621,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:63153608..63153621,+ | |||
|coexpression_cluster_id=C1116 | |||
|description=CAGE_peak_at_chr1:63153608..63153621,+ | |description=CAGE_peak_at_chr1:63153608..63153621,+ | ||
|id=chr1:63153608..63153621,+ | |id=chr1:63153608..63153621,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;2.34e-23;1!CL:0000197;1.31e-15;6!CL:0000098;1.31e-15;6!CL:0002167;1.31e-15;6!CL:0002321;8.33e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.22e-15,6;CL:0000098,1.22e-15,6;CL:0002167,1.22e-15,6 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.66e-09;3!UBERON:0006241;1.35e-08;3!UBERON:0003057;1.35e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.34e-23;1!DOID:4549;1.34e-23;1!DOID:5861;1.34e-23;1!DOID:6496;1.34e-23;1!DOID:3193;3.06e-12;2!DOID:962;3.06e-12;2!DOID:1192;1.35e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.34e-23,1;DOID:4549,1.34e-23,1;DOID:5861,1.34e-23,1;DOID:6496,1.34e-23,1;DOID:3193,3.24e-12,2;DOID:962,3.24e-12,2;DOID:1192,1.40e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-34!57;UBERON:0005068!1.71e-34!57;UBERON:0006241!1.71e-34!57;UBERON:0007135!1.71e-34!57;UBERON:0002616!1.87e-30!59;UBERON:0000955!2.43e-28!69;UBERON:0006238!2.43e-28!69;UBERON:0005743!2.62e-28!86;UBERON:0001017!4.72e-28!82;UBERON:0001893!3.00e-27!34;UBERON:0002780!8.39e-27!41;UBERON:0001890!8.39e-27!41;UBERON:0006240!8.39e-27!41;UBERON:0000073!1.48e-26!94;UBERON:0001016!1.48e-26!94;UBERON:0003080!5.04e-26!42;UBERON:0002791!1.51e-25!33;UBERON:0002020!6.63e-25!34;UBERON:0003528!6.63e-25!34;UBERON:0001869!6.56e-24!32;UBERON:0002346!5.53e-22!90;UBERON:0003075!9.07e-22!86;UBERON:0007284!9.07e-22!86;UBERON:0000153!6.22e-18!129;UBERON:0007811!6.22e-18!129;UBERON:0003056!7.34e-18!61;UBERON:0007023!8.71e-18!115;UBERON:0000033!6.99e-17!123;UBERON:0000956!7.03e-15!25;UBERON:0000203!7.03e-15!25;UBERON:0002619!1.43e-12!22;UBERON:0002308!2.01e-12!9;UBERON:0000125!2.01e-12!9;UBERON:0002420!3.01e-12!9;UBERON:0007245!3.01e-12!9;UBERON:0010009!3.01e-12!9;UBERON:0010011!3.01e-12!9;UBERON:0000454!3.01e-12!9;UBERON:0009663!6.33e-12!7;UBERON:0000924!7.14e-12!173;UBERON:0006601!7.14e-12!173;UBERON:0001950!1.51e-11!20;UBERON:0004121!1.68e-11!169;UBERON:0002298!1.51e-10!8;UBERON:0000200!5.30e-10!6;UBERON:0000369!5.50e-10!4;UBERON:0002435!5.50e-10!4;UBERON:0000204!5.50e-10!4;UBERON:0010082!5.50e-10!4;UBERON:0003076!1.71e-09!15;UBERON:0003057!1.71e-09!15;UBERON:0000025!2.39e-08!194;UBERON:0002771!2.66e-08!3;UBERON:0005383!3.42e-08!3;UBERON:0005382!3.42e-08!3;UBERON:0001896!3.59e-08!3;UBERON:0005290!3.59e-08!3;UBERON:0010096!3.59e-08!3;UBERON:0000475!1.96e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003714;3.06e-12;2!UBERON:0002418;8.96e-09;3!UBERON:0004755;8.96e-09;3!UBERON:0002240;1.35e-08;3!UBERON:0005174;1.35e-08;3!UBERON:0001137;1.35e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,3.24e-12,2;UBERON:0002418,8.96e-09,3;UBERON:0004755,8.96e-09,3;UBERON:0002240,1.30e-08,3;UBERON:0005174,1.30e-08,3;UBERON:0001137,1.30e-08,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,2.3195768543631,1.41932173530541,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77487913158015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.94234309472401,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.412079291905832,0.337017719270924,0,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0.212574920101683,0,1.11728983594649,0,0,0,0.352675943690684,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,3.35939757630285,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,1.2679671827502,0.339854229375634,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0.413731983447581,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:63153608..63153621,+ | |short_description=p@chr1:63153608..63153621,+ | ||
}} | }} |
Latest revision as of 09:37, 28 July 2015
Short description: | p@chr1:63153608..63153621, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:63153608..63153621, + |
Coexpression cluster: | C1116_Wilms_extraskeletal_mesodermal_retina_Olfactory_leiomyoblastoma_spinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.22e-15 | 6 |
sensory epithelial cell | 1.22e-15 | 6 |
olfactory epithelial cell | 1.22e-15 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 3.24e-12 | 2 |
cartilage tissue | 8.96e-09 | 3 |
skeletal tissue | 8.96e-09 | 3 |
spinal cord | 1.30e-08 | 3 |
dorsal region element | 1.30e-08 | 3 |
dorsum | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.34e-23 | 1 |
extraosseous chondrosarcoma | 1.34e-23 | 1 |
myxoid chondrosarcoma | 1.34e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 1.34e-23 | 1 |
peripheral nerve sheath neoplasm | 3.24e-12 | 2 |
neurofibroma | 3.24e-12 | 2 |
peripheral nervous system neoplasm | 1.40e-08 | 3 |