FFCP PHASE1:Hg19::chr1:59495552..59495566,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:59495552..59495566,- | |||
|description=CAGE_peak_at_chr1:59495552..59495566,- | |description=CAGE_peak_at_chr1:59495552..59495566,- | ||
|id=chr1:59495552..59495566,- | |id=chr1:59495552..59495566,- | ||
|ontology_enrichment_celltype=CL:0000349!2.90e-07!3;CL:0002577!2.90e-07!3;CL:0000077!6.67e-07!19;CL:0002541!8.11e-07!3 | |ontology_enrichment_celltype=CL:0000349!2.90e-07!3;CL:0002577!2.90e-07!3;CL:0000077!6.67e-07!19;CL:0002541!8.11e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.04e-21;19!CL:0002577;9.04e-21;3!CL:0002537;1.29e-12;5!CL:0000077;7.21e-12;19!CL:0002541;5.61e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.81e-21,19;CL:0002577,9.05e-21,3;CL:0002537,1.06e-12,5;CL:0000077,5.88e-12,19;CL:0002541,5.74e-10,3;CL:0000213,1.37e-07,58;CL:0000215,1.37e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.85e-16!14;UBERON:0000158!5.85e-16!14;UBERON:0003124!5.76e-14!7;UBERON:0000478!4.96e-11!24;UBERON:0001987!8.27e-09!4;UBERON:0004340!8.27e-09!4;UBERON:0004923!6.34e-07!57;UBERON:0000476!8.11e-07!3;UBERON:0000920!8.11e-07!3 | |ontology_enrichment_uberon=UBERON:0005631!5.85e-16!14;UBERON:0000158!5.85e-16!14;UBERON:0003124!5.76e-14!7;UBERON:0000478!4.96e-11!24;UBERON:0001987!8.27e-09!4;UBERON:0004340!8.27e-09!4;UBERON:0004923!6.34e-07!57;UBERON:0000476!8.11e-07!3;UBERON:0000920!8.11e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.03e-16;24!UBERON:0005631;1.27e-16;10!UBERON:0000158;1.27e-16;10!UBERON:0001987;1.01e-15;4!UBERON:0003124;5.61e-10;3!UBERON:0000920;5.61e-10;3!UBERON:0000305;3.79e-09;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.53e-29,14;UBERON:0000158,1.53e-29,14;UBERON:0003124,6.97e-24,7;UBERON:0000478,9.38e-17,24;UBERON:0001987,1.01e-15,4;UBERON:0004340,1.01e-15,4;UBERON:0000995,9.27e-11,21;UBERON:0005795,3.03e-10,22;UBERON:0003975,3.03e-10,22;UBERON:0000920,5.74e-10,3;UBERON:0000305,3.30e-09,7;UBERON:0004175,5.98e-09,25;UBERON:0004871,4.12e-08,8 | |||
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| ||
|short_description=p@chr1:59495552..59495566,- | |short_description=p@chr1:59495552..59495566,- | ||
}} | }} |
Latest revision as of 09:25, 28 July 2015
Short description: | p@chr1:59495552..59495566, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:59495552..59495566, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.81e-21 | 19 |
placental epithelial cell | 9.05e-21 | 3 |
amnion mesenchymal stem cell | 1.06e-12 | 5 |
mesothelial cell | 5.88e-12 | 19 |
chorionic membrane mesenchymal stem cell | 5.74e-10 | 3 |
lining cell | 1.37e-07 | 58 |
barrier cell | 1.37e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.53e-29 | 14 |
membranous layer | 1.53e-29 | 14 |
chorion | 6.97e-24 | 7 |
extraembryonic structure | 9.38e-17 | 24 |
placenta | 1.01e-15 | 4 |
allantois | 1.01e-15 | 4 |
uterus | 9.27e-11 | 21 |
embryonic uterus | 3.03e-10 | 22 |
internal female genitalia | 3.03e-10 | 22 |
egg chorion | 5.74e-10 | 3 |
amnion | 3.30e-09 | 7 |
internal genitalia | 5.98e-09 | 25 |
somatic layer of lateral plate mesoderm | 4.12e-08 | 8 |