FFCP PHASE1:Hg19::chr1:56962127..56962135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:56962127..56962135,- | |||
|coexpression_cluster_id=C666 | |coexpression_cluster_id=C666 | ||
|description=CAGE_peak_at_chr1:56962127..56962135,- | |description=CAGE_peak_at_chr1:56962127..56962135,- | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.06e-40;3!CL:0000388;1.06e-40;3!CL:0000214;4.83e-19;3!CL:0000499;6.07e-17;28!CL:0000153;5.05e-14;9!CL:0000447;5.05e-14;9!CL:0000327;1.22e-08;15!CL:0002617;7.03e-08;2 | |ontology_enrichment_celltype_v019=CL:0000135;1.06e-40;3!CL:0000388;1.06e-40;3!CL:0000214;4.83e-19;3!CL:0000499;6.07e-17;28!CL:0000153;5.05e-14;9!CL:0000447;5.05e-14;9!CL:0000327;1.22e-08;15!CL:0002617;7.03e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000135,6.64e-41,3;CL:0000388,6.64e-41,3;CL:0000214,4.62e-19,3;CL:0000499,4.98e-17,28;CL:0000153,4.33e-14,9;CL:0000447,4.33e-14,9;CL:0000327,1.11e-08,15;CL:0002617,6.58e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;7.63e-15;1!UBERON:0003852;7.63e-15;1 | |ontology_enrichment_development_v019=UBERON:0003099;7.63e-15;1!UBERON:0003852;7.63e-15;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!8.25e-07!7 | |ontology_enrichment_uberon=UBERON:0003124!8.25e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.06e-40;3!UBERON:0000043;1.06e-40;3!UBERON:0007845;1.06e-40;3!UBERON:0006915;4.83e-19;3!UBERON:0007616;4.83e-19;3!UBERON:0002217;4.83e-19;3!UBERON:0002018;4.83e-19;3!UBERON:0004905;1.07e-15;8!UBERON:0000982;1.07e-15;8!UBERON:0004770;1.07e-15;8!UBERON:0005705;7.63e-15;1!UBERON:0008193;7.63e-15;1!UBERON:0010912;7.63e-15;1!UBERON:0002514;7.63e-15;1!UBERON:0003457;7.63e-15;1!UBERON:0008907;7.63e-15;1!UBERON:0008001;7.63e-15;1!UBERON:0007213;7.63e-15;1!UBERON:0009891;7.63e-15;1!UBERON:0007914;7.63e-15;1!UBERON:0007375;7.63e-15;1!UBERON:0003323;7.63e-15;1!UBERON:0010258;7.63e-15;1!UBERON:0005253;7.63e-15;1!UBERON:0007842;7.63e-15;1!UBERON:0002397;7.63e-15;1!UBERON:0003113;7.63e-15;1!UBERON:0003277;7.63e-15;1!UBERON:0001709;7.63e-15;1!UBERON:0002244;7.63e-15;1!UBERON:0005620;7.63e-15;1!UBERON:0010364;7.63e-15;1!UBERON:0004288;7.63e-15;1!UBERON:0004457;3.79e-14;9!UBERON:0000042;3.79e-14;9!UBERON:0004089;4.53e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0007846;1.06e-40;3!UBERON:0000043;1.06e-40;3!UBERON:0007845;1.06e-40;3!UBERON:0006915;4.83e-19;3!UBERON:0007616;4.83e-19;3!UBERON:0002217;4.83e-19;3!UBERON:0002018;4.83e-19;3!UBERON:0004905;1.07e-15;8!UBERON:0000982;1.07e-15;8!UBERON:0004770;1.07e-15;8!UBERON:0005705;7.63e-15;1!UBERON:0008193;7.63e-15;1!UBERON:0010912;7.63e-15;1!UBERON:0002514;7.63e-15;1!UBERON:0003457;7.63e-15;1!UBERON:0008907;7.63e-15;1!UBERON:0008001;7.63e-15;1!UBERON:0007213;7.63e-15;1!UBERON:0009891;7.63e-15;1!UBERON:0007914;7.63e-15;1!UBERON:0007375;7.63e-15;1!UBERON:0003323;7.63e-15;1!UBERON:0010258;7.63e-15;1!UBERON:0005253;7.63e-15;1!UBERON:0007842;7.63e-15;1!UBERON:0002397;7.63e-15;1!UBERON:0003113;7.63e-15;1!UBERON:0003277;7.63e-15;1!UBERON:0001709;7.63e-15;1!UBERON:0002244;7.63e-15;1!UBERON:0005620;7.63e-15;1!UBERON:0010364;7.63e-15;1!UBERON:0004288;7.63e-15;1!UBERON:0004457;3.79e-14;9!UBERON:0000042;3.79e-14;9!UBERON:0004089;4.53e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,6.64e-41,3;UBERON:0000043,6.64e-41,3;UBERON:0007845,6.64e-41,3;UBERON:0006915,4.62e-19,3;UBERON:0007616,4.62e-19,3;UBERON:0002217,4.62e-19,3;UBERON:0002018,4.62e-19,3;UBERON:0004905,1.28e-15,8;UBERON:0000982,1.28e-15,8;UBERON:0004770,1.28e-15,8;UBERON:0005705,8.17e-15,1;UBERON:0008193,8.17e-15,1;UBERON:0010912,8.17e-15,1;UBERON:0002514,8.17e-15,1;UBERON:0003457,8.17e-15,1;UBERON:0008907,8.17e-15,1;UBERON:0008001,8.17e-15,1;UBERON:0007213,8.17e-15,1;UBERON:0009891,8.17e-15,1;UBERON:0007914,8.17e-15,1;UBERON:0009292,8.17e-15,1;UBERON:0003099,8.17e-15,1;UBERON:0007375,8.17e-15,1;UBERON:0003323,8.17e-15,1;UBERON:0010258,8.17e-15,1;UBERON:0007842,8.17e-15,1;UBERON:0009494,8.17e-15,1;UBERON:0010042,8.17e-15,1;UBERON:0010045,8.17e-15,1;UBERON:0010259,8.17e-15,1;UBERON:0010359,8.17e-15,1;UBERON:0009526,8.17e-15,1;UBERON:0002397,8.17e-15,1;UBERON:0003113,8.17e-15,1;UBERON:0003277,8.17e-15,1;UBERON:0001709,8.17e-15,1;UBERON:0004066,8.17e-15,1;UBERON:0002244,8.17e-15,1;UBERON:0005620,8.17e-15,1;UBERON:0004362,8.17e-15,1;UBERON:0010364,8.17e-15,1;UBERON:0010046,8.17e-15,1;UBERON:0005868,8.17e-15,1;UBERON:0007238,8.17e-15,1;UBERON:0004288,8.17e-15,1;UBERON:0004068,8.17e-15,1;UBERON:0010334,8.17e-15,1;UBERON:0003852,8.17e-15,1;UBERON:0010253,8.17e-15,1;UBERON:0004457,9.61e-11,12;UBERON:0000042,9.61e-11,12;UBERON:0005253,4.69e-08,2;UBERON:0004089,4.69e-08,2 | |||
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|short_description=p@chr1:56962127..56962135,- | |short_description=p@chr1:56962127..56962135,- | ||
}} | }} |
Latest revision as of 09:18, 28 July 2015
Short description: | p@chr1:56962127..56962135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:56962127..56962135, - |
Coexpression cluster: | C666_tenocyte_Synoviocyte_Fibroblast_Chondrocyte_Nucleus_normal_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 6.64e-41 | 3 |
tendon cell | 6.64e-41 | 3 |
synovial cell | 4.62e-19 | 3 |
stromal cell | 4.98e-17 | 28 |
GAG secreting cell | 4.33e-14 | 9 |
carbohydrate secreting cell | 4.33e-14 | 9 |
extracellular matrix secreting cell | 1.11e-08 | 15 |
adipocyte of breast | 6.58e-08 | 2 |