FFCP PHASE1:Hg19::chr1:52377174..52377191,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:52377174..52377191,- | |||
|description=CAGE_peak_at_chr1:52377174..52377191,- | |||
|id=chr1:52377174..52377191,- | |||
|ontology_enrichment_celltype=CL:0000057!1.26e-13!75;CL:0000055!1.44e-09!180;CL:0002620!2.67e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.40e-14;1!CL:0002625;1.40e-14;1!CL:0000216;1.40e-14;1!CL:0000054;6.14e-08;2!CL:0000123;6.14e-08;2!CL:0000137;6.14e-08;2!CL:0000092;6.14e-08;2!CL:0000242;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,8.17e-15,1;CL:0002625,8.17e-15,1;CL:0000216,8.17e-15,1;CL:0000242,5.74e-08,2;CL:0000054,8.04e-08,2;CL:0000137,8.04e-08,2;CL:0000092,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.52e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:200;6.14e-08;2!DOID:4305;6.14e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,8.04e-08,2;DOID:4305,8.04e-08,2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.40e-14;1!UBERON:0001343;1.40e-14;1!UBERON:0004910;1.40e-14;1!UBERON:0004813;1.40e-14;1!UBERON:0004909;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,8.17e-15,1;UBERON:0001343,8.17e-15,1;UBERON:0004910,8.17e-15,1;UBERON:0005154,8.17e-15,1;UBERON:0005295,8.17e-15,1;UBERON:0004813,8.17e-15,1;UBERON:0005297,8.17e-15,1;UBERON:0005294,8.17e-15,1;UBERON:0010141,8.17e-15,1;UBERON:0005891,8.17e-15,1;UBERON:0004909,4.69e-08,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.550236083880135,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0,0.737005903870608,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0.919463387397059,0.150238058906597,0,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.337552664482532,0,0.252433774244115,0.184099797284599,0,0,0.302256294682921,0.508681776931463,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,1.00928340350251,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0.799783929456456,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.473107245101804,0.35142424497814,0,0,0,0.664225598535437,0,0.60818530127658,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,0.128139149255701,0,0.965123526861645,0,0.771048469013278,0.355123450626254,0.410635780069046,0,0.464841513839837,0,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0.539107359730903,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,0,0,2.32422774648643,1.5740617341532,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0.556543525114529,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0.687944129886466,0,0,0,0,0,0.225980740780532,0,0,0.0633107959558787,0,0,0,0,0,0,0.686379991447858,0,0.124252535565433,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,6.09576953731672,0,0,0,0,0,1.72844298240254,0.979762080328227,1.19730191562487,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,0,0,0,0,0,0,0,1.40500471742064,0.434763085832475,0.149254802886874,0.467426619694449,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0.318593534327405,1.34940933649081,0,0.414706207840855,0.53168342911599,0.521745061811734,0,0.380805212168795,0,0.909243296012797,0.107410557042488,0.464033759878494,0.398095888698616,1.20008329398946,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0.192914038270915,0.675769762612291,0.256241518587947,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504143392443436,0,0.322951291263702,0,0,0,0,0,1.1441462864015,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.0657727735628491,0.590969204419841,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0.801711364730253,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0.795803100645473,0,0,0,0,0,0,1.88126918544609,0,0,0,0,0,0.679708458751268,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0.436350690340377,0,0.743990036333503,0,0.865253124247578,0.126166424835079,0.546327859818478,0.253397002022874,0.101988829741982,0.26721740526556,0.0918948995348449,0.250707539292375,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0.332660356546013,0,0.320182037633146,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:52377174..52377191,- | |||
}} |
Latest revision as of 09:02, 28 July 2015
Short description: | p@chr1:52377174..52377191, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:52377174..52377191, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 8.17e-15 | 1 |
seminiferous tubule epithelial cell | 8.17e-15 | 1 |
Sertoli cell | 8.17e-15 | 1 |
Merkel cell | 5.74e-08 | 2 |
bone matrix secreting cell | 8.04e-08 | 2 |
osteocyte | 8.04e-08 | 2 |
osteoclast | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 8.17e-15 | 1 |
seminiferous tubule of testis | 8.17e-15 | 1 |
epithelium of male gonad | 8.17e-15 | 1 |
epithelial cord | 8.17e-15 | 1 |
sex cord | 8.17e-15 | 1 |
seminiferous tubule epithelium | 8.17e-15 | 1 |
testis sex cord | 8.17e-15 | 1 |
genital ridge | 8.17e-15 | 1 |
primitive sex cord of indifferent gonad | 8.17e-15 | 1 |
coelomic epithelium | 8.17e-15 | 1 |
epithelium of gonad | 4.69e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 8.04e-08 | 2 |
bone giant cell tumor | 8.04e-08 | 2 |