FFCP PHASE1:Hg19::chr1:47903227..47903240,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:47903227..47903240,- | |||
|description=CAGE_peak_at_chr1:47903227..47903240,- | |description=CAGE_peak_at_chr1:47903227..47903240,- | ||
|id=chr1:47903227..47903240,- | |id=chr1:47903227..47903240,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;8.72e-18;1!CL:0002549;1.44e-09;2!CL:0000322;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.57e-09,2;CL:0000322,7.28e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.90e-18;1!UBERON:0004874;8.72e-18;1 | |||
|ontology_enrichment_disease=DOID:0050687!2.35e-15!143;DOID:162!5.72e-14!235;DOID:305!2.16e-13!106;DOID:14566!3.87e-13!239 | |||
|ontology_enrichment_disease_v019=DOID:3910;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.12e-09,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.90e-18;1!UBERON:0000997;3.74e-18;1!UBERON:0005056;3.74e-18;1!UBERON:0004176;3.74e-18;1!UBERON:0000989;8.72e-18;1!UBERON:0008811;8.72e-18;1!UBERON:0002360;8.32e-10;2!UBERON:0000094;8.32e-10;2!UBERON:0010743;8.32e-10;2!UBERON:0004903;1.44e-09;2!UBERON:0005629;1.44e-09;2!UBERON:0005358;1.44e-09;2!UBERON:0001886;1.44e-09;2!UBERON:0004086;1.44e-09;2!UBERON:0005282;1.44e-09;2!UBERON:0002173;1.44e-09;2!UBERON:0002186;1.44e-09;2!UBERON:0005281;1.44e-09;2!UBERON:0001155;2.24e-08;9!UBERON:0000059;5.23e-07;11!UBERON:0004821;8.62e-07;3!UBERON:0007499;8.62e-07;3!UBERON:0003215;8.62e-07;3!UBERON:0010368;8.62e-07;3!UBERON:0009911;8.62e-07;3!UBERON:0002299;8.62e-07;3!UBERON:0006524;8.62e-07;3!UBERON:0008874;8.62e-07;3!UBERON:0002169;8.62e-07;3!UBERON:0004894;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,3.16e-18,1;UBERON:0007645,3.16e-18,1;UBERON:0007647,3.16e-18,1;UBERON:0010115,3.16e-18,1;UBERON:0000997,3.75e-18,1;UBERON:0005056,3.75e-18,1;UBERON:0000989,6.23e-18,1;UBERON:0008811,6.23e-18,1;UBERON:0006258,6.23e-18,1;UBERON:0005876,6.23e-18,1;UBERON:0004874,6.23e-18,1;UBERON:0002360,8.69e-10,2;UBERON:0000094,8.69e-10,2;UBERON:0010743,8.69e-10,2;UBERON:0004903,1.12e-09,2;UBERON:0002173,1.12e-09,2;UBERON:0002186,1.12e-09,2;UBERON:0005629,1.57e-09,2;UBERON:0005358,1.57e-09,2;UBERON:0001886,1.57e-09,2;UBERON:0004086,1.57e-09,2;UBERON:0005282,1.57e-09,2;UBERON:0005281,1.57e-09,2;UBERON:0001155,1.90e-08,9;UBERON:0000059,4.57e-07,11;UBERON:0004821,7.28e-07,3;UBERON:0003215,7.28e-07,3;UBERON:0010368,7.28e-07,3;UBERON:0009911,7.28e-07,3;UBERON:0002299,7.28e-07,3;UBERON:0006524,7.28e-07,3;UBERON:0008874,7.28e-07,3;UBERON:0002169,7.28e-07,3;UBERON:0004894,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0.852139206383318,0.284338464974843,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.604820229674197,1.33720097891754,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0.454072282934794,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0.37223371266318,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0.43596006883328,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0.896681151948218,0.394061520403854,0.862510299438069,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0,0.783204629850962,0.686286847621712,0.413536052245775,0,0.320182673410333,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.604297247958111,0,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.255225424989168,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0,1.00988449083511,0.569134746787313,0.159426272728822,0,0,1.05836791361941,0,0,1.14117339516596,0,0,0,0,0,0,0.687010689511529,0,0.447352215784832,0,0,0,0,0.270455678475983,0.33307196799782,0,0.561421621224659,0,0.121360521749513,0.557216921387392,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0.552567831062295,0.251932747854276,0.102268682502155,0.615424027305347,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,1.30213880542617,0,0,0,1.5255219017566,0,0.344743373241465,0,0.347249989866585,0,0,0,0,0,0.438770794307945,0,0.41827123283581,0.230850775511391,0.113942055847001,0.23056390438806,0.0897576444097721,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0.141353071433941,0,3.98104772431402,0.176915129006678,1.83309043480088,0,0.741383633679017,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,3.6648216184523,0.450970258243478,0.622129148383483,0,0,0.313932918407225,0,0,0.277349346026277,0,2.35181753794506,0.261177619741208,0,0.171986032471617,0,0.146178634172371,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0.144090417154106,0.114536596165916,0,0.288109595976299,0.248505071130865,0,0,0,0.305994652908965,0,0,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.393709926058995,0.423366660328922,0.795229689809303,0,0,0,0,0,0,0.0607495566580247,0,0,0.472091293214983,0,0,0.575745591958336,0,0,0,0,0,0,0,0.903017728242729,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0,0,0.221858103073705,0.372578417648301,0,0,0.454947352624943,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0.303859956177382,0,0,0.132864840313363,0,0.327609848846413,0,0.633936370075881,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.392590874004102,0,0.183428598521679,0.115525666150338,0,0,0.397832444232549,0,0,0,0.261906694481422,0.327543835020193,0.147856086217045,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0.514464028312255,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0.215927591218621,0,0.500335809236594,0,0,0,0,0,0.3414369541879,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0.588901401691458,0,0,0,0,0,0.233939463462106,0.198950775161368,0.118920090777569,0,0.109940516745429,0.754814217833368,0.0771741581079447,0,0,0,0.707029641304878,0.196308467114945,0,0.8453114551668,0.169927114687817,0.0939839179798536,0,0.0999411559249289,0.178553938605658,0,0.160482733378337,0,0,0.143339583151451,0.631086248772738,0.0679914901909147,0.436350690340377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| ||
|short_description=p@chr1:47903227..47903240,- | |short_description=p@chr1:47903227..47903240,- | ||
}} | }} |
Latest revision as of 08:53, 28 July 2015
Short description: | p@chr1:47903227..47903240, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:47903227..47903240, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.57e-09 | 2 |
pneumocyte | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dura mater | 3.16e-18 | 1 |
future meninx | 3.16e-18 | 1 |
ectomeninx | 3.16e-18 | 1 |
future dura mater | 3.16e-18 | 1 |
mammalian vulva | 3.75e-18 | 1 |
external female genitalia | 3.75e-18 | 1 |
penis | 6.23e-18 | 1 |
intromittent organ | 6.23e-18 | 1 |
lateral plate mesenchyme | 6.23e-18 | 1 |
undifferentiated genital tubercle | 6.23e-18 | 1 |
somatopleure | 6.23e-18 | 1 |
meninx | 8.69e-10 | 2 |
membrane organ | 8.69e-10 | 2 |
meningeal cluster | 8.69e-10 | 2 |
bronchoalveolar duct junction | 1.12e-09 | 2 |
alveolar duct | 1.12e-09 | 2 |
bronchiole | 1.12e-09 | 2 |
vascular plexus | 1.57e-09 | 2 |
ventricle of nervous system | 1.57e-09 | 2 |
choroid plexus | 1.57e-09 | 2 |
brain ventricle | 1.57e-09 | 2 |
ventricular system of brain | 1.57e-09 | 2 |
ventricular system of central nervous system | 1.57e-09 | 2 |
colon | 1.90e-08 | 9 |
large intestine | 4.57e-07 | 11 |
pulmonary alveolus epithelium | 7.28e-07 | 3 |
alveolus | 7.28e-07 | 3 |
pulmonary lobule | 7.28e-07 | 3 |
lobule | 7.28e-07 | 3 |
alveolus of lung | 7.28e-07 | 3 |
alveolar system | 7.28e-07 | 3 |
pulmonary acinus | 7.28e-07 | 3 |
alveolar sac | 7.28e-07 | 3 |
alveolar wall | 7.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.12e-09 | 2 |