FFCP PHASE1:Hg19::chr1:3536165..3536184,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:3536165..3536184,+ | |||
|description=CAGE_peak_at_chr1:3536165..3536184,+ | |description=CAGE_peak_at_chr1:3536165..3536184,+ | ||
|id=chr1:3536165..3536184,+ | |id=chr1:3536165..3536184,+ | ||
|ontology_enrichment_celltype=CL:0002274!9.99e-16!5;CL:0000457!9.99e-16!5;CL:0002191!9.99e-16!5;CL:0000097!9.99e-16!5;CL:0000831!9.99e-16!5;CL:0002028!9.99e-16!5;CL:0002618!2.18e-10!3;CL:0002139!1.26e-08!24;CL:0002543!1.44e-08!6;CL:0000163!1.47e-08!9 | |ontology_enrichment_celltype=CL:0002274!9.99e-16!5;CL:0000457!9.99e-16!5;CL:0002191!9.99e-16!5;CL:0000097!9.99e-16!5;CL:0000831!9.99e-16!5;CL:0002028!9.99e-16!5;CL:0002618!2.18e-10!3;CL:0002139!1.26e-08!24;CL:0002543!1.44e-08!6;CL:0000163!1.47e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0002618;2.76e-18;3!CL:0002032;7.13e-15;1!CL:0000557;7.13e-15;1!CL:0000037;1.41e-14;1!CL:0001024;1.41e-14;1!CL:0000097;1.09e-11;5!CL:0002543;1.26e-09;6!CL:0000054;8.04e-08;2!CL:0000137;8.04e-08;2!CL:0000092;8.04e-08;2!CL:0000163;7.00e-07;9 | |ontology_enrichment_celltype_v019=CL:0002618;2.76e-18;3!CL:0002032;7.13e-15;1!CL:0000557;7.13e-15;1!CL:0000037;1.41e-14;1!CL:0001024;1.41e-14;1!CL:0000097;1.09e-11;5!CL:0002543;1.26e-09;6!CL:0000054;8.04e-08;2!CL:0000137;8.04e-08;2!CL:0000092;8.04e-08;2!CL:0000163;7.00e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002618,3.60e-18,3;CL:0001024,1.23e-14,1;CL:0000097,1.09e-11,5;CL:0002028,1.09e-11,5;CL:0000037,5.51e-10,168;CL:0002543,1.44e-09,6;CL:0000988,2.10e-09,177;CL:0000763,5.72e-09,108;CL:0000049,5.72e-09,108;CL:0000054,7.03e-08,2;CL:0000137,7.03e-08,2;CL:0000092,7.03e-08,2;CL:0002032,4.08e-07,161;CL:0000837,4.08e-07,161;CL:0000163,7.00e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;8.87e-11;31!DOID:1240;3.37e-09;39!DOID:200;8.04e-08;2!DOID:4305;8.04e-08;2!DOID:2531;1.33e-07;51!DOID:0060083;1.33e-07;51 | |ontology_enrichment_disease_v019=DOID:8692;8.87e-11;31!DOID:1240;3.37e-09;39!DOID:200;8.04e-08;2!DOID:4305;8.04e-08;2!DOID:2531;1.33e-07;51!DOID:0060083;1.33e-07;51 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.51e-12,51;DOID:0060083,2.51e-12,51;DOID:1240,4.09e-12,39;DOID:8692,8.78e-11,31;DOID:200,7.03e-08,2;DOID:4305,7.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.71e-07!69 | |ontology_enrichment_uberon=UBERON:0000055!2.71e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0002066;2.29e-11;5!UBERON:0002371;1.52e-10;12!UBERON:0001474;3.32e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0002066;2.29e-11;5!UBERON:0002371;1.52e-10;12!UBERON:0001474;3.32e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,2.68e-11,5 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0,0,2.93600439334847,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.361439152384566,0,0.289693037921647,0,0,0,0,0,0,0,0,0,0,0,0,1.71598473234038,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.803697554556718,1.12264686313085,1.23872628531654,0,0,0.183201743930407,0,0,0,0,0.12663051166458,1.58891016975863,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0.276149695926898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,8.37527504423104,2.81754988842323,0.207328115540772,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929691098594572,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.956557636372934,0,0.957526850661834,0,0,0,3.42352018549788,0,0,0,5.45999455352578,3.8341944366299,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.858743477033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274083849293502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,6.38732940334862,0,17.0876780281554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0.915360273587694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:3536165..3536184,+ | |short_description=p@chr1:3536165..3536184,+ | ||
}} | }} |
Latest revision as of 07:34, 28 July 2015
Short description: | p@chr1:3536165..3536184, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:3536165..3536184, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 3.60e-18 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.23e-14 | 1 |
mast cell | 1.09e-11 | 5 |
basophil mast progenitor cell | 1.09e-11 | 5 |
hematopoietic stem cell | 5.51e-10 | 168 |
vein endothelial cell | 1.44e-09 | 6 |
hematopoietic cell | 2.10e-09 | 177 |
myeloid cell | 5.72e-09 | 108 |
common myeloid progenitor | 5.72e-09 | 108 |
bone matrix secreting cell | 7.03e-08 | 2 |
osteocyte | 7.03e-08 | 2 |
osteoclast | 7.03e-08 | 2 |
hematopoietic oligopotent progenitor cell | 4.08e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-07 | 161 |
endocrine cell | 7.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 2.68e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.51e-12 | 51 |
immune system cancer | 2.51e-12 | 51 |
leukemia | 4.09e-12 | 39 |
myeloid leukemia | 8.78e-11 | 31 |
giant cell tumor | 7.03e-08 | 2 |
bone giant cell tumor | 7.03e-08 | 2 |