FFCP PHASE1:Hg19::chr1:31943959..31943987,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:31943959..31943987,+
|short_description=p@chr1:31943959..31943987,+
|description=CAGE_peak_at_chr1:31943959..31943987,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:31943959..31943987,+ | |||
|description=CAGE_peak_at_chr1:31943959..31943987,+ | |||
|id=chr1:31943959..31943987,+ | |||
|ontology_enrichment_celltype=CL:0002541!6.09e-08!3;CL:0000239!7.56e-08!3;CL:1000615!7.56e-08!3;CL:0002306!7.56e-08!3;CL:1000507!7.10e-07!12;CL:1000494!7.10e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000159;6.01e-22;2!CL:0000313;4.53e-12;1!CL:1001319;1.19e-11;1!CL:1000600;1.19e-11;1!CL:0000319;1.19e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,5.41e-22,2;CL:0000313,4.53e-12,1;CL:0000319,1.07e-11,1;CL:1001319,1.63e-11,1;CL:1000600,1.63e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.63e-12;1!UBERON:0003918;3.21e-10;10!UBERON:0007687;3.21e-10;10!UBERON:0007297;8.93e-07;2 | |||
|ontology_enrichment_disease=DOID:299!2.61e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;3.85e-12;1!DOID:3603;3.85e-12;1!DOID:2152;4.53e-12;1!DOID:3030;1.19e-11;1!DOID:299;6.01e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,4.06e-12,1;DOID:3603,4.06e-12,1;DOID:2152,4.53e-12,1;DOID:3030,1.07e-11,1;DOID:299,5.96e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000058!1.61e-11!26;UBERON:0002113!9.52e-11!27;UBERON:0003918!9.52e-11!27;UBERON:0005095!9.52e-11!27;UBERON:0007687!9.52e-11!27;UBERON:0000489!2.48e-10!32;UBERON:0000464!2.22e-09!104;UBERON:0006947!4.58e-09!3;UBERON:0004054!4.58e-09!3;UBERON:0006554!5.95e-09!44;UBERON:0001008!1.13e-08!45;UBERON:0000466!3.54e-08!126;UBERON:0000476!6.09e-08!3;UBERON:0000920!6.09e-08!3;UBERON:0006853!7.56e-08!3;UBERON:0007685!7.56e-08!3;UBERON:0004134!7.56e-08!3;UBERON:0000080!9.70e-08!18;UBERON:0002120!9.70e-08!18;UBERON:0004875!9.70e-08!18;UBERON:0005721!9.70e-08!18;UBERON:0005754!9.70e-08!18;UBERON:0007297!9.70e-08!18;UBERON:0002553!4.66e-07!70;UBERON:0001044!6.23e-07!6;UBERON:0003293!6.23e-07!6;UBERON:0003294!6.23e-07!6;UBERON:0010047!6.23e-07!6;UBERON:0000167!6.23e-07!6;UBERON:0009773!7.10e-07!12;UBERON:0001231!7.10e-07!12;UBERON:0004810!7.10e-07!12;UBERON:0005904!7.32e-07!4;UBERON:0004876!8.06e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.69e-15;3!UBERON:0004054;1.69e-15;3!UBERON:0000998;2.63e-12;1!UBERON:0006868;2.63e-12;1!UBERON:0001000;3.27e-12;1!UBERON:0005352;3.27e-12;1!UBERON:0004911;4.53e-12;1!UBERON:0005904;7.37e-12;4!UBERON:0004645;1.19e-11;1!UBERON:0001256;1.19e-11;1!UBERON:0001259;1.19e-11;1!UBERON:0000058;3.31e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.69e-15,3;UBERON:0004054,1.69e-15,3;UBERON:0000998,2.63e-12,1;UBERON:0006868,2.63e-12,1;UBERON:0001000,3.27e-12,1;UBERON:0005352,3.27e-12,1;UBERON:0004911,4.53e-12,1;UBERON:0005904,7.37e-12,4;UBERON:0004645,1.63e-11,1;UBERON:0001256,1.63e-11,1;UBERON:0001259,1.63e-11,1;UBERON:0000489,2.01e-08,31;UBERON:0002113,9.07e-07,26;UBERON:0003918,9.07e-07,26;UBERON:0011143,9.07e-07,26;UBERON:0005095,9.07e-07,26;UBERON:0007687,9.07e-07,26 | |||
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| ||
|short_description=p@chr1:31943959..31943987,+ | |||
}} | }} |
Latest revision as of 07:11, 28 July 2015
Short description: | p@chr1:31943959..31943987, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:31943959..31943987, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 5.41e-22 | 2 |
serous secreting cell | 4.53e-12 | 1 |
mucus secreting cell | 1.07e-11 | 1 |
bladder cell | 1.63e-11 | 1 |
lower urinary tract cell | 1.63e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.69e-15 | 3 |
internal male genitalia | 1.69e-15 | 3 |
seminal vesicle | 2.63e-12 | 1 |
seminal fluid secreting gland | 2.63e-12 | 1 |
vas deferens | 3.27e-12 | 1 |
spermatic cord | 3.27e-12 | 1 |
epithelium of female gonad | 4.53e-12 | 1 |
duct of male reproductive system | 7.37e-12 | 4 |
urinary bladder urothelium | 1.63e-11 | 1 |
wall of urinary bladder | 1.63e-11 | 1 |
mucosa of urinary bladder | 1.63e-11 | 1 |
cavitated compound organ | 2.01e-08 | 31 |
kidney | 9.07e-07 | 26 |
kidney mesenchyme | 9.07e-07 | 26 |
upper urinary tract | 9.07e-07 | 26 |
kidney rudiment | 9.07e-07 | 26 |
kidney field | 9.07e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 4.06e-12 | 1 |
mucinous cystadenocarcinoma | 4.06e-12 | 1 |
ovary epithelial cancer | 4.53e-12 | 1 |
mucinous adenocarcinoma | 1.07e-11 | 1 |
adenocarcinoma | 5.96e-07 | 25 |