FFCP PHASE1:Hg19::chr1:240502414..240502420,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:240502414..240502420,+ | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_at_chr1:240502414..240502420,+ | |description=CAGE_peak_at_chr1:240502414..240502420,+ | ||
|id=chr1:240502414..240502420,+ | |id=chr1:240502414..240502420,+ | ||
|ontology_enrichment_celltype=CL:0002580!1.52e-13!3;CL:0002334!1.12e-12!12;CL:0000057!2.78e-11!75;CL:0000055!6.53e-10!180;CL:0002582!5.18e-07!3 | |ontology_enrichment_celltype=CL:0002580!1.52e-13!3;CL:0002334!1.12e-12!12;CL:0000057!2.78e-11!75;CL:0000055!6.53e-10!180;CL:0002582!5.18e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002595;7.01e-08;5!CL:0002149;8.02e-07;6!CL:0002255;8.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,6.55e-08,5;CL:0002149,8.02e-07,6;CL:0002255,8.02e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.73e-08;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;5.48e-18;2!DOID:3001;8.02e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.48e-18,2;DOID:3001,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002199!6.06e-08!45;UBERON:0002416!6.06e-08!45;UBERON:0002097!2.11e-07!40;UBERON:0000310!4.18e-07!10 | |ontology_enrichment_uberon=UBERON:0002199!6.06e-08!45;UBERON:0002416!6.06e-08!45;UBERON:0002097!2.11e-07!40;UBERON:0000310!4.18e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.07e-17;2!UBERON:0002757;1.07e-17;2!UBERON:0010134;1.07e-17;2!UBERON:0005408;1.07e-17;2!UBERON:0001899;1.07e-17;2!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0002784;1.57e-09;4!UBERON:0002046;5.73e-08;5!UBERON:0000945;7.01e-08;5!UBERON:0010039;7.01e-08;5!UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.27e-17,2;UBERON:0002757,1.27e-17,2;UBERON:0010134,1.27e-17,2;UBERON:0005408,1.27e-17,2;UBERON:0001899,1.27e-17,2;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0002784,1.70e-09,4;UBERON:0002046,5.73e-08,5;UBERON:0004117,5.73e-08,5;UBERON:0007689,5.73e-08,5;UBERON:0007123,5.73e-08,5;UBERON:0003091,5.73e-08,5;UBERON:0003834,6.55e-08,5;UBERON:0001533,6.55e-08,5 | |||
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| ||
|short_description=p@chr1:240502414..240502420,+ | |short_description=p@chr1:240502414..240502420,+ | ||
}} | }} |
Latest revision as of 05:40, 28 July 2015
Short description: | p@chr1:240502414..240502420, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:240502414..240502420, + |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 6.55e-08 | 5 |
epithelial cell of uterus | 8.02e-07 | 6 |
stromal cell of endometrium | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.27e-17 | 2 |
regional part of epithalamus | 1.27e-17 | 2 |
secretory circumventricular organ | 1.27e-17 | 2 |
circumventricular organ | 1.27e-17 | 2 |
epithalamus | 1.27e-17 | 2 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
regional part of diencephalon | 1.70e-09 | 4 |
thyroid gland | 5.73e-08 | 5 |
pharyngeal pouch | 5.73e-08 | 5 |
thyroid diverticulum | 5.73e-08 | 5 |
pharyngeal pouch 2 | 5.73e-08 | 5 |
thyroid primordium | 5.73e-08 | 5 |
thoracic segment blood vessel | 6.55e-08 | 5 |
subclavian artery | 6.55e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.48e-18 | 2 |
female reproductive endometrioid cancer | 8.02e-07 | 6 |