FFCP PHASE1:Hg19::chr1:237634440..237634461,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:237634440..237634461,+ | |||
|description=CAGE_peak_at_chr1:237634440..237634461,+ | |description=CAGE_peak_at_chr1:237634440..237634461,+ | ||
|id=chr1:237634440..237634461,+ | |id=chr1:237634440..237634461,+ | ||
|ontology_enrichment_celltype=CL:0002150!2.21e-09!3;CL:0000861!2.21e-09!3;CL:0002563!7.74e-07!4 | |ontology_enrichment_celltype=CL:0002150!2.21e-09!3;CL:0000861!2.21e-09!3;CL:0002563!7.74e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000167;3.08e-07;1!CL:0000164;3.08e-07;1!CL:0000502;3.08e-07;1!CL:0000172;3.08e-07;1!CL:0000173;3.08e-07;1 | |ontology_enrichment_celltype_v019=CL:0000167;3.08e-07;1!CL:0000164;3.08e-07;1!CL:0000502;3.08e-07;1!CL:0000172;3.08e-07;1!CL:0000173;3.08e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.99e-07,1;CL:0000164,2.99e-07,1;CL:0000502,2.99e-07,1;CL:0000172,2.99e-07,1;CL:0000173,2.99e-07,1;CL:0002351,2.99e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;3.08e-07;1 | |ontology_enrichment_development_v019=CL:0002351;3.08e-07;1 | ||
|ontology_enrichment_disease=DOID:162!2.10e-27!235;DOID:14566!1.64e-26!239;DOID:0050687!2.69e-19!143;DOID:305!1.51e-16!106;DOID:0050686!1.68e-12!137;DOID:170!5.80e-07!6 | |ontology_enrichment_disease=DOID:162!2.10e-27!235;DOID:14566!1.64e-26!239;DOID:0050687!2.69e-19!143;DOID:305!1.51e-16!106;DOID:0050686!1.68e-12!137;DOID:170!5.80e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:4430;3.08e-07;1!DOID:0060085;4.38e-07;1!DOID:3165;4.38e-07;1!DOID:0060121;4.38e-07;1!DOID:2438;4.38e-07;1!DOID:4418;4.38e-07;1!DOID:8552;6.38e-07;1!DOID:1749;9.17e-07;14 | |ontology_enrichment_disease_v019=DOID:4430;3.08e-07;1!DOID:0060085;4.38e-07;1!DOID:3165;4.38e-07;1!DOID:0060121;4.38e-07;1!DOID:2438;4.38e-07;1!DOID:4418;4.38e-07;1!DOID:8552;6.38e-07;1!DOID:1749;9.17e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.70e-15,235;DOID:14566,4.76e-15,239;DOID:305,1.35e-11,106;DOID:0050687,4.91e-10,143;DOID:4430,2.99e-07,1;DOID:0060085,4.51e-07,1;DOID:3165,4.51e-07,1;DOID:0060121,4.51e-07,1;DOID:2438,4.51e-07,1;DOID:4418,4.51e-07,1;DOID:8552,7.15e-07,1;DOID:1749,9.53e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001242!7.74e-07!4;UBERON:0001262!7.74e-07!4;UBERON:0004786!7.74e-07!4;UBERON:0004808!7.74e-07!4;UBERON:0001277!7.74e-07!4 | |ontology_enrichment_uberon=UBERON:0001242!7.74e-07!4;UBERON:0001262!7.74e-07!4;UBERON:0004786!7.74e-07!4;UBERON:0004808!7.74e-07!4;UBERON:0001277!7.74e-07!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94375362205146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,5.411491295897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90062679019893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16568367167754,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0,0,0,0,0,3.90776190804081,1.11362469558097,0,6.22048060494761,0.33307196799782,1.4098700508785,16.2812270155151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,1.137934482855,0,0.472775363535873,0,0.874813840149763,0,0,0,0,0,0,0,9.80446171670912,0.557694977114413,0,0,0,0.0897576444097721,0,0,0,0,0,0,2.16075186470203,0,0,0,0.189753732724185,0.794682894901893,0,0.326465616318295,0.989471500037586,2.59666367690509,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,2.1045278718029,0.207376382794494,0,0,0,0,1.13843818411917,0,0,0,0,0,0,2.90268993867255,5.99332400106722,4.02365739560725,0,0,0,0.411125773940253,3.37814839895082,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,1.58460277786965,0,0,0.271808412147228,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33073541132698,0,0,0,0,0,0,0,0,3.52997839222158,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,2.3489486276869,0,0,0,0,0,0,0,0,0,0,0,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,1.72519698234691,0,0,0,0,0.123935764259002,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,11.679578501622,0,0,0,0,0,0,0,0.20170506870352,5.47059807863165,0.523813388962845,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72742072974897,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,1.07965256976767,0.975343399858155,0,0,0,0,0,0,0,1.58124514854544,0,0,0,0,3.29222107453066,0,5.89191367754065,0,0,0.4226557275834,0,0,0,0,0,9.52816153632368,0.320965466756673,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,2.13050538903166,0,0,0,0,0,0.215166616178029,0,0,0,0,0.898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr1:237634440..237634461,+ | |short_description=p@chr1:237634440..237634461,+ | ||
}} | }} |
Latest revision as of 05:33, 28 July 2015
Short description: | p@chr1:237634440..237634461, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:237634440..237634461, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.99e-07 | 1 |
enteroendocrine cell | 2.99e-07 | 1 |
type D enteroendocrine cell | 2.99e-07 | 1 |
somatostatin secreting cell | 2.99e-07 | 1 |
pancreatic D cell | 2.99e-07 | 1 |
progenitor cell of endocrine pancreas | 2.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.70e-15 | 235 |
disease of cellular proliferation | 4.76e-15 | 239 |
carcinoma | 1.35e-11 | 106 |
cell type cancer | 4.91e-10 | 143 |
somatostatinoma | 2.99e-07 | 1 |
organ system benign neoplasm | 4.51e-07 | 1 |
skin benign neoplasm | 4.51e-07 | 1 |
integumentary system benign neoplasm | 4.51e-07 | 1 |
dermis tumor | 4.51e-07 | 1 |
cutaneous fibrous histiocytoma | 4.51e-07 | 1 |
chronic myeloid leukemia | 7.15e-07 | 1 |
squamous cell carcinoma | 9.53e-07 | 14 |